RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 DEFB126Q9BYW3 111 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 ERRFI1Q9UJM3 462 aaPredicted RBP16.46■□□□□ 0.23
NUP50-208ENST00000430547 DAPP1Q9UN19 280 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 OSGIN2Q9Y236 505 aa16.46■□□□□ 0.23
NUP50-208ENST00000430547 FCHO1O14526 889 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 SH3BGRLO75368 114 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 TGFB1P01137 390 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 IFNA16P05015 189 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 RBP1P09455 135 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 CNTFP26441 200 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 EEF1DP29692 281 aaKnown RBP16.45■□□□□ 0.22
NUP50-208ENST00000430547 CD96P40200 585 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 SSR2P43308 183 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 CLCN2P51788 898 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 RAP1GDS1P52306 607 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 TSNAXIP1Q2TAA8 658 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 LIPJQ5W064 366 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 CLNKQ7Z7G1 428 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 FAM98AQ8NCA5 519 aaKnown RBP16.45■□□□□ 0.22
NUP50-208ENST00000430547 B3GNT7Q8NFL0 401 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 UHMK1Q8TAS1 419 aaKnown RBP16.45■□□□□ 0.22
NUP50-208ENST00000430547 REPS1Q96D71 796 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 SCYL1Q96KG9 808 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 CSF3RQ99062 836 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 NPAS2Q99743 824 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 LYRM4Q9HD34 91 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 ADAP2Q9NPF8 381 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 PRDM7Q9NQW5 492 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 KLHL1Q9NR64 748 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 PCDHGB6Q9Y5F9 930 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 PCDHGA11Q9Y5H2 935 aa16.45■□□□□ 0.22
NUP50-208ENST00000430547 TRBV11-1A0A0K0K1C0 115 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 CDK2AP1O14519 115 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 MAN1A2O60476 641 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 ECHS1P30084 290 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 ST13P50502 369 aaKnown RBP16.44■□□□□ 0.22
NUP50-208ENST00000430547 HNRNPFP52597 415 aaKnown RBP16.44■□□□□ 0.22
NUP50-208ENST00000430547 PER3P56645 1201 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 PCDH1Q08174 1060 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 STX4Q12846 297 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 GTF2H2Q13888 395 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 PCBP2Q15366 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
NUP50-208ENST00000430547 TECRLQ5HYJ1 363 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 KHDRBS2Q5VWX1 349 aaKnown RBP16.44■□□□□ 0.22
NUP50-208ENST00000430547 GTF2H2CQ6P1K8 395 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 GFRALQ6UXV0 394 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 IFT20Q8IY31 132 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 ACOT4Q8N9L9 421 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 MDS2Q8NDY4 140 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 TMEM52Q8NDY8 209 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 NFAM1Q8NET5 270 aaPredicted RBP16.44■□□□□ 0.22
NUP50-208ENST00000430547 VMP1Q96GC9 406 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 SIGLEC12Q96PQ1 595 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 CCDC77Q9BR77 488 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 LRFN1Q9P244 771 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 PLEKHB1Q9UF11 243 aaPredicted RBP16.44■□□□□ 0.22
NUP50-208ENST00000430547 ZNF180Q9UJW8 692 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 FBXW2Q9UKT8 454 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 TMCO1Q9UM00 188 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 NFU1Q9UMS0 254 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 POLEQ07864 2286 aa16.44■□□□□ 0.22
NUP50-208ENST00000430547 DIDO1Q9BTC0 2240 aaKnown RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 EXOC1LA0A1B0GW35 172 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 SAP18O00422 153 aaKnown RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 RTCAO00442 366 aaKnown RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 CYR61O00622 381 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 KLK8O60259 260 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 UGDHO60701 494 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 SMIM24O75264 130 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 MLYCDO95822 493 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 HIST1H1TP22492 207 aaPredicted RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 ATP5A1P25705 553 aaKnown RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 TPP2P29144 1249 aaPredicted RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 PIK3CBP42338 1070 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 CYB561P49447 251 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 PMP22Q01453 160 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 C4orf17Q53FE4 359 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 LGSNQ5TDP6 509 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 ZNF324BQ6AW86 544 aaPredicted RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 SPINK14Q6IE38 97 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 METTL2BQ6P1Q9 378 aaKnown RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 GOLGA7Q7Z5G4 137 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 TMEM132CQ8N3T6 1108 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 PTGR2Q8N8N7 351 aaPredicted RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 HUS1BQ8NHY5 278 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 ATP6V1E2Q96A05 226 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 ISL2Q96A47 359 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 TMEM125Q96AQ2 219 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 RGMAQ96B86 450 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 GPR78Q96P69 363 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 MTERF1Q99551 399 aaKnown RBP16.43■□□□□ 0.22
NUP50-208ENST00000430547 OR51B5Q9H339 312 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 IPPKQ9H8X2 491 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 CLCA3PQ9Y6N3 262 aa16.43■□□□□ 0.22
NUP50-208ENST00000430547 A1L4Q6 167 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 LRRC14BA6NHZ5 514 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 TRIM49D1C9J1S8 452 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 CTNSO60931 367 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 SIX3O95343 332 aaPredicted RBP16.42■□□□□ 0.22
NUP50-208ENST00000430547 LDLRP01130 860 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms