RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 NUDT13Q86X67 352 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 METTL4Q8N3J2 472 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 EXTL1Q92935 676 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 FER1L6-AS2Q96M78 137 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 SORBS1Q9BX66 1292 aaKnown RBP18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 ACPTQ9BZG2 426 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 SHCBP1LQ9BZQ2 653 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 NKIRAS1Q9NYS0 192 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 VPS29Q9UBQ0 182 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 MMACHCQ9Y4U1 282 aa18.91■□□□□ 0.62
CSNK1E-207ENST00000430335 CACNA1GO43497 2377 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 A0A0A6YYD5 115 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 WDR91A4D1P6 747 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 ERVH48-1M5A8F1 160 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 CYR61O00622 381 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 CDC123O75794 336 aaPredicted RBP18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 C8orf89P0DMQ9 161 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 ACPPP15309 386 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 RRADP55042 308 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 SLAMF1Q13291 335 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 CHI3L2Q15782 390 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 MRM1Q6IN84 353 aaKnown RBP18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 PAGE2Q7Z2X7 111 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 TRIM46Q7Z4K8 759 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 ZNF595Q8IYB9 648 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 OR11G2Q8NGC1 345 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 METTL21AQ8WXB1 218 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 WBP1Q96G27 269 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 HBEGFQ99075 208 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 MAPKAP1Q9BPZ7 522 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 MRPL1Q9BYD6 325 aaKnown RBP18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 LYARQ9NX58 379 aaKnown RBP18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 MS4A12Q9NXJ0 267 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 C19orf25Q9UFG5 118 aaPredicted RBP18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 MRPS33Q9Y291 106 aaKnown RBP18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 SPACA6W5XKT8 324 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 ITPR1Q14643 2758 aa18.9■□□□□ 0.62
CSNK1E-207ENST00000430335 BLACEA4D250 179 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 ARGFXA6NJG6 315 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 HMGB1P1B2RPK0 211 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 TMEM114B3SHH9 223 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 FAM227AF5H4B4 570 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 B4GALT2O60909 372 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 EEDO75530 441 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 SNUPNO95149 360 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 CHN1P15882 459 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 GRK2P25098 689 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 SERPINB3P29508 390 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 ARRB2P32121 409 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 LINC00303Q3SY05 128 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 DCAF10Q5QP82 559 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 KANK2Q63ZY3 851 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 CLEC6AQ6EIG7 209 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 CLYBLQ8N0X4 340 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 PAIP2Q9BPZ3 127 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 ING2Q9H160 280 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 ACBD3Q9H3P7 528 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 MLXIPLQ9NP71 852 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 PRDM9Q9NQV7 894 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 ZNF446Q9NWS9 450 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 PHF11Q9UIL8 331 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 FBXL4Q9UKA2 621 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 TRAF6Q9Y4K3 522 aa18.89■□□□□ 0.61
CSNK1E-207ENST00000430335 OR2W5A6NFC9 320 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 CLDN4O14493 209 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 PRMT3O60678 531 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 HSD17B7P56937 341 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 NSDHLQ15738 373 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 CES4AQ5XG92 561 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 FAAH2Q6GMR7 532 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 CYP20A1Q6UW02 462 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 ATG14Q6ZNE5 492 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 COMMD6Q7Z4G1 85 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 GPR180Q86V85 440 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 SCUBE1Q8IWY4 988 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 FAM47BQ8NA70 645 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 CHTF18Q8WVB6 975 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 C8orf44Q96CB5 159 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 CSF3RQ99062 836 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 MESP1Q9BRJ9 268 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 FBXW2Q9UKT8 454 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 ASB4Q9Y574 426 aa18.88■□□□□ 0.61
CSNK1E-207ENST00000430335 IGKV3D-11A0A0A0MRZ8 115 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 IGHV1-45A0A0A0MS14 117 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 SYNDIG1LA6NDD5 238 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 TMPRSS11DO60235 418 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 CHEK2O96017 543 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 HPP00738 406 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 KLK1P06870 262 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 FAM58BPP0C7Q3 252 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 NEFHP12036 1026 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 COX6A1P12074 109 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 BGNP21810 368 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 CPN2P22792 545 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 TPP2P29144 1249 aaPredicted RBP18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 HNRNPFP52597 415 aaKnown RBP18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 ABCE1P61221 599 aaKnown RBP18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 BTG2P78543 158 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 HMGCS1Q01581 520 aa18.87■□□□□ 0.61
CSNK1E-207ENST00000430335 SPIN4Q56A73 249 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms