RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ARSKQ6UWY0 536 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 HSDL2Q6YN16 418 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 TRILQ7L0X0 811 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 WDR53Q7Z5U6 358 aaPredicted RBP16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 CLNKQ7Z7G1 428 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 LIX1LQ8IVB5 337 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 FAM109AQ8N4B1 249 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 TMEM251Q8N6I4 163 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 GPATCH11Q8N954 259 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 TMEM52Q8NDY8 209 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 CCT6BQ92526 530 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 GAL3ST3Q96A11 431 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 RMND5BQ96G75 393 aaPredicted RBP16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 GPATCH1Q9BRR8 931 aaKnown RBP16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 ZNF358Q9NW07 568 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 SLC17A6Q9P2U8 582 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 SLC22A14Q9Y267 594 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 MRPS33Q9Y291 106 aaKnown RBP16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 KCNE2Q9Y6J6 123 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 CLCA3PQ9Y6N3 262 aa16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 NSD1Q96L73 2696 aaPredicted RBP16.98■□□□□ 0.31
UPK3BP1-201ENST00000428678 ERI3O43414 337 aaKnown RBP16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 NRDCO43847 1150 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 CCDC175P0C221 793 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 DRD2P14416 443 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 CNR1P21554 472 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 ADH7P40394 386 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 RAB38P57729 211 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 FOXD4Q12950 439 aaPredicted RBP16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 SNTB1Q13884 538 aaKnown RBP16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 ELAVL1Q15717 326 aaKnown RBP16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 SLC25A35Q3KQZ1 300 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 RTL6Q6ICC9 239 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 RTL4Q6ZR62 310 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 TMEM132CQ8N3T6 1108 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 NAT8LQ8N9F0 302 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 NPLQ9BXD5 320 aaPredicted RBP16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 CLEC4MQ9H2X3 399 aaPredicted RBP16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 LDAHQ9H6V9 325 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 EXO5Q9H790 373 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 IL1RL2Q9HB29 575 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 ALKBH4Q9NXW9 302 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 PLEKHA6Q9Y2H5 1048 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 CLDN16Q9Y5I7 305 aa16.97■□□□□ 0.31
UPK3BP1-201ENST00000428678 MYOCOSA0A1B0GUC4 107 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 ATP6AP2A0A1C7CYW4 349 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 AQP7O14520 342 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 B3GALT2O43825 422 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 ATP6AP2O75787 350 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 CELA3AP09093 270 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 DNASE1P24855 282 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 HNRNPH1P31943 449 aaKnown RBP16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 KIR2DL3P43628 341 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 MAN2A2P49641 1150 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 HK2P52789 917 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 C1orf185Q5T7R7 199 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 WLSQ5T9L3 541 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 SBSNQ6UWP8 590 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 FAM47EQ6ZV65 393 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 ZNF595Q8IYB9 648 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 KLHDC8AQ8IYD2 350 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 SCYL1Q96KG9 808 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 GSX1Q9H4S2 264 aaPredicted RBP16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 IKZF3Q9UKT9 509 aa16.96■□□□□ 0.31
UPK3BP1-201ENST00000428678 DNHD1Q96M86 4753 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 A0A088AWK7 358 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 A0A1B0GVC2 190 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 WDR1O75083 606 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 TTC4O95801 387 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 ZNF10P21506 573 aaPredicted RBP16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 DNASE1L1P49184 302 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 PLA2G16P53816 162 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 PPP1R3AQ16821 1122 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 BBS9Q3SYG4 887 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 CCDC137Q6PK04 289 aaKnown RBP16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 CNTN4Q8IWV2 1026 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 PPIL6Q8IXY8 311 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 TRIM58Q8NG06 486 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 DAZLQ92904 295 aaKnown RBP16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 SLCO2A1Q92959 643 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 SARAFQ96BY9 339 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 MS4A6EQ96DS6 147 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 EGFL8Q99944 293 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 CNPPD1Q9BV87 410 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 OR8D2Q9GZM6 311 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 PPANQ9NQ55 473 aaKnown RBP16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 SACM1LQ9NTJ5 587 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 EDARQ9UNE0 448 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 VWA7Q9Y334 891 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 MPDZO75970 2070 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 ARHGAP21Q5T5U3 1957 aa16.95■□□□□ 0.3
UPK3BP1-201ENST00000428678 SYNDIG1LA6NDD5 238 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 FAM47E-STBD1D6RA91 191 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 SUSD5O60279 629 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 H2AFYO75367 372 aaKnown RBP16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 BANF1O75531 89 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 FAM155BO75949 473 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 P04436 131 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 CDC25BP30305 580 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms