RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 WDR70Q9NW82 654 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 NLKQ9UBE8 527 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 FAM50BQ9Y247 325 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 NEDD8-MDP1E9PL57 170 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 FAM20BO75063 409 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PAHP00439 452 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR56A5P0C7T3 313 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SLC2A3P11169 496 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 SSTR4P31391 388 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 KIR3DL1P43629 444 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 AGFG1P52594 562 aaKnown RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 ZNF140P52738 457 aaPredicted RBP4.93□□□□□ -1.62
RIF1-203ENST00000428287 HOXC5Q00444 222 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TMEM81Q6P7N7 255 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR8J1Q8NGP2 316 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 OR4L1Q8NH43 312 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 PRELID3BQ9Y3B1 194 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 HRH3Q9Y5N1 445 aa4.93□□□□□ -1.62
RIF1-203ENST00000428287 TRDV1A0A1B0GX56 115 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 CACNB4O00305 520 aaPredicted RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 ACSM4P0C7M7 580 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 EBLN1P0CF75 366 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 HLA-EP13747 358 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SULT1E1P49888 294 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 TPMTP51580 245 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 QPRTQ15274 297 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SEC23BQ15437 767 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 DCAF4L1Q3SXM0 396 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SPIN4Q56A73 249 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 KRT74Q7RTS7 529 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ZNF605Q86T29 641 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 NANOGP1Q8N7R0 232 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 RTL3Q8N8U3 475 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 COQ8BQ96D53 544 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 MGME1Q9BQP7 344 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 TSEN34Q9BSV6 310 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 SERHL2Q9H4I8 314 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 RIBC2Q9H4K1 309 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 IFT22Q9H7X7 185 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SP110Q9HB58 689 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 LRTM1Q9HBL6 345 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 CRTAC1Q9NQ79 661 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 EXO1Q9UQ84 846 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 CACNG2Q9Y698 323 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 CYP4B1P13584 511 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 DRD2P14416 443 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 PPIBP23284 216 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 HSPA7P48741 367 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 AANATQ16613 207 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 GGTA1PQ4G0N0 100 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 PAN2Q504Q3 1202 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 STX19Q8N4C7 294 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 POLR2J2Q9GZM3 115 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 CATSPERZQ9NTU4 200 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 FAM120CQ9NX05 1096 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 CYB5R1Q9UHQ9 305 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 RNF112Q9ULX5 631 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 UBQLN1Q9UMX0 589 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 TLN1Q9Y490 2541 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 GSTA4O15217 222 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SCO1O75880 301 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 INSRRP14616 1297 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 RPS14P62263 151 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 SLC14A1Q13336 389 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 TNFAIP1Q13829 316 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 MED22Q15528 200 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 PTPRNQ16849 979 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 MZT2BQ6NZ67 158 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 LRFN4Q6PJG9 635 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 DOK6Q6PKX4 331 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 FAM46DQ8NEK8 389 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SLC16A10Q8TF71 515 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 CHFRQ96EP1 664 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 MSANTD3Q96H12 275 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 FCRL2Q96LA5 508 aaPredicted RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 KCTD5Q9NXV2 234 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 REV1Q9UBZ9 1251 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ZNF490Q9ULM2 529 aaPredicted RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 LIPT1Q9Y234 373 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 H3BM21 787 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 RFXANKO14593 260 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 RPP40O75818 363 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 HMGN1P05114 100 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 FOSL1P15407 271 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 UGT2B7P16662 529 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 EPORP19235 508 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 BTCP35070 178 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SRSF11Q05519 484 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 EEF1A2Q05639 463 aaKnown RBP4.92□□□□□ -1.62
RIF1-203ENST00000428287 LAPTM4AQ15012 233 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 KIAA1211LQ6NV74 962 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 CMIPQ8IY22 773 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ARRDC4Q8NCT1 418 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 OR8H1Q8NGG4 311 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 NUDT8Q8WV74 236 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 ACPTQ9BZG2 426 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 SLC6A15Q9H2J7 730 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 LATS2Q9NRM7 1088 aa4.92□□□□□ -1.62
RIF1-203ENST00000428287 C1GALT1Q9NS00 363 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms