RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 MRPS33Q9Y291 106 aaKnown RBP17.81■□□□□ 0.44
AL954642.1-201ENST00000428088 ACOT9Q9Y305 439 aa17.81■□□□□ 0.44
AL954642.1-201ENST00000428088 HMX2A2RU54 273 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 NPIPA5E9PKD4 350 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 K7EPI3 171 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 RTCAO00442 366 aaKnown RBP17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 CCL21O00585 134 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 CDK2AP1O14519 115 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 FCHO1O14526 889 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 C2P06681 752 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 PCNAP12004 261 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 TRHRP34981 398 aaPredicted RBP17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 CA7P43166 264 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 HLCSP50747 726 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 E2F2Q14209 437 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 TERF2Q15554 542 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 UAP1Q16222 522 aaPredicted RBP17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 ZNF793Q6ZN11 406 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 UBE3DQ7Z6J8 389 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 CENPLQ8N0S6 344 aaPredicted RBP17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 FAM98AQ8NCA5 519 aaKnown RBP17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 ADAMTS18Q8TE60 1221 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 ZNF473Q8WTR7 871 aaKnown RBP17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 NCLNQ969V3 563 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 GPR137Q96N19 417 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 KCNC2Q96PR1 638 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 MS4A8Q9BY19 250 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 TRIM45Q9H8W5 580 aaPredicted RBP17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 ZNF223Q9UK11 482 aaPredicted RBP17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 NPIPA1Q9UND3 350 aa17.8■□□□□ 0.44
AL954642.1-201ENST00000428088 NME2P1O60361 137 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 URI1O94763 535 aaPredicted RBP17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 TGFB1P01137 390 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 IFNA16P05015 189 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 MTHFD2P13995 350 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 NME2P22392 152 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 GPR143P51810 404 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 KRTCAP3Q53RY4 240 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 UBAP2Q5T6F2 1119 aaKnown RBP17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 MED27Q6P2C8 311 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 LAS2Q8IYD9 372 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 ARMC10Q8N2F6 343 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 CPSF7Q8N684 471 aaKnown RBP17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 OR7G3Q8NG95 312 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 UBTD2Q8WUN7 234 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 UBE2E3Q969T4 207 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 VMP1Q96GC9 406 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 CCDC120Q96HB5 630 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 C16orf45Q96MC5 204 aaPredicted RBP17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 MAPKAP1Q9BPZ7 522 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 ADAP2Q9NPF8 381 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 SNX15Q9NRS6 342 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 KCMF1Q9P0J7 381 aa17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 SUCOQ9UBS9 1254 aaKnown RBP17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 PPIEQ9UNP9 301 aaKnown RBP17.79■□□□□ 0.44
AL954642.1-201ENST00000428088 A0A087X1B8 175 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 SAP18O00422 153 aaKnown RBP17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 ZNHIT1O43257 154 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 PRKNO60260 465 aaPredicted RBP17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 SLC19A2O60779 497 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 CTNSO60931 367 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 ITGA10O75578 1167 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 MLYCDO95822 493 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 EPB42P16452 691 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 RCN2Q14257 317 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 C3AR1Q16581 482 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 FAM83EQ2M2I3 478 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 RNFT1Q5M7Z0 435 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 SIAH3Q8IW03 269 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 RNF175Q8N4F7 328 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 TEX9Q8N6V9 391 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 ACOT4Q8N9L9 421 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 SRFBP1Q8NEF9 429 aaKnown RBP17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 RHEBL1Q8TAI7 183 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 TMEM125Q96AQ2 219 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 CCDC77Q9BR77 488 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 TBCDQ9BTW9 1192 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 ALOXE3Q9BYJ1 711 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 ROGDIQ9GZN7 287 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 LIN28AQ9H9Z2 209 aaKnown RBP17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 LYRM4Q9HD34 91 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 NINJ2Q9NZG7 142 aa17.78■□□□□ 0.44
AL954642.1-201ENST00000428088 A0A096LPK6 155 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 SYCE1LA8MT33 242 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 LDB3O75112 727 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 GFAPP14136 432 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 ATP5A1P25705 553 aaKnown RBP17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 STX4Q12846 297 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 DDX39BQ13838 428 aaKnown RBP17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 PFKFB4Q16877 469 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 AP5B1Q2VPB7 878 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 C16orf47Q6ZP98 133 aaPredicted RBP17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 CHSY3Q70JA7 882 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 TMEM132CQ8N3T6 1108 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 TMEM156Q8N614 296 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 ITLN2Q8WWU7 325 aaPredicted RBP17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 SREK1Q8WXA9 508 aaKnown RBP17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 MAGED4Q96JG8 741 aa17.77■□□□□ 0.44
AL954642.1-201ENST00000428088 SORBS1Q9BX66 1292 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms