RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 LRRC14BA6NHZ5 514 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 CYR61O00622 381 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 TGFB1P01137 390 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 SP1P08047 785 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 PHBP35232 272 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 CASP2P42575 452 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 SERPINB8P50452 374 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 CLCN2P51788 898 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 TGM3Q08188 693 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 DDX39BQ13838 428 aaKnown RBP17.18■□□□□ 0.34
PSPC1-202ENST00000427943 E2F2Q14209 437 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 MAPKAPK3Q16644 382 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 MED27Q6P2C8 311 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 UBE3DQ7Z6J8 389 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 MYLK4Q86YV6 388 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-202ENST00000427943 ZNF595Q8IYB9 648 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 TEX9Q8N6V9 391 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 HORMAD2Q8N7B1 307 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 NOA1Q8NC60 698 aaKnown RBP17.18■□□□□ 0.34
PSPC1-202ENST00000427943 NCLNQ969V3 563 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 KCNC2Q96PR1 638 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 CDC42EP4Q9H3Q1 356 aaKnown RBP17.18■□□□□ 0.34
PSPC1-202ENST00000427943 ACSS3Q9H6R3 686 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 MTRF1LQ9UGC7 380 aaKnown RBP17.18■□□□□ 0.34
PSPC1-202ENST00000427943 DMGDHQ9UI17 866 aaKnown RBP17.18■□□□□ 0.34
PSPC1-202ENST00000427943 ZNF223Q9UK11 482 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-202ENST00000427943 FBXW2Q9UKT8 454 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 GTF3C1Q12789 2109 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 SYCE1LA8MT33 242 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 SAP18O00422 153 aaKnown RBP17.17■□□□□ 0.34
PSPC1-202ENST00000427943 FCHO1O14526 889 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 SLC25A12O75746 678 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 ACSL3O95573 720 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 ALDOAP04075 364 aaKnown RBP17.17■□□□□ 0.34
PSPC1-202ENST00000427943 GFAPP14136 432 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 EPB42P16452 691 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 DCTP40126 519 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 ALDH6A1Q02252 535 aaKnown RBP17.17■□□□□ 0.34
PSPC1-202ENST00000427943 SETDB1Q15047 1291 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 TERF2Q15554 542 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 ZRSR2Q15696 482 aaKnown RBP17.17■□□□□ 0.34
PSPC1-202ENST00000427943 PFKFB4Q16877 469 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 FAM83EQ2M2I3 478 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 GRHL2Q6ISB3 625 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 SLC25A25Q6KCM7 469 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-202ENST00000427943 ZNF227Q86WZ6 799 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 LAS2Q8IYD9 372 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 MMGT1Q8N4V1 131 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 OR7G3Q8NG95 312 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 RHEBL1Q8TAI7 183 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 SREK1Q8WXA9 508 aaKnown RBP17.17■□□□□ 0.34
PSPC1-202ENST00000427943 UBE2E3Q969T4 207 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 VMP1Q96GC9 406 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 MAPKAP1Q9BPZ7 522 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 VPS11Q9H270 941 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 ADAP2Q9NPF8 381 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 ANGPTL3Q9Y5C1 460 aa17.17■□□□□ 0.34
PSPC1-202ENST00000427943 CENPEQ02224 2701 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 ASPDHA6ND91 283 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 PRKNO60260 465 aaPredicted RBP17.16■□□□□ 0.34
PSPC1-202ENST00000427943 NME2P1O60361 137 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 LDB3O75112 727 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 IFNA16P05015 189 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 NME2P22392 152 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 TYK2P29597 1187 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 SSR2P43308 183 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 CYB561P49447 251 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 NAA30Q147X3 362 aaPredicted RBP17.16■□□□□ 0.34
PSPC1-202ENST00000427943 ACOT4Q8N9L9 421 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 FAM98AQ8NCA5 519 aaKnown RBP17.16■□□□□ 0.34
PSPC1-202ENST00000427943 RELTQ969Z4 430 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 TBCDQ9BTW9 1192 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 SORBS1Q9BX66 1292 aaKnown RBP17.16■□□□□ 0.34
PSPC1-202ENST00000427943 ROGDIQ9GZN7 287 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 OR51B5Q9H339 312 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 KCMF1Q9P0J7 381 aa17.16■□□□□ 0.34
PSPC1-202ENST00000427943 CPSF2Q9P2I0 782 aaKnown RBP17.16■□□□□ 0.34
PSPC1-202ENST00000427943 TEX15Q9BXT5 2789 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 NPIPA5E9PKD4 350 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 ITGA10O75578 1167 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 KLHL2O95198 593 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 HIST1H1TP22492 207 aaPredicted RBP17.15■□□□□ 0.34
PSPC1-202ENST00000427943 ATP5A1P25705 553 aaKnown RBP17.15■□□□□ 0.34
PSPC1-202ENST00000427943 HLCSP50747 726 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 ID2Q02363 134 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 RBPJQ06330 500 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 RCN2Q14257 317 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 ACAP2Q15057 778 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 KLC3Q6P597 504 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 C16orf47Q6ZP98 133 aaPredicted RBP17.15■□□□□ 0.34
PSPC1-202ENST00000427943 CCDC91Q7Z6B0 441 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 ARMC10Q8N2F6 343 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 CPSF7Q8N684 471 aaKnown RBP17.15■□□□□ 0.34
PSPC1-202ENST00000427943 SRFBP1Q8NEF9 429 aaKnown RBP17.15■□□□□ 0.34
PSPC1-202ENST00000427943 IFT81Q8WYA0 676 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 TMEM125Q96AQ2 219 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 CMTM7Q96FZ5 175 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 GPR137Q96N19 417 aa17.15■□□□□ 0.34
PSPC1-202ENST00000427943 GPR78Q96P69 363 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms