RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NUDT6P53370 316 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 CRADDP78560 199 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 HNRNPA0Q13151 305 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 GPR17Q13304 367 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 BIKQ13323 160 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ITPK1Q13572 414 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 DGKZQ13574 1117 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 MTMR1Q13613 665 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SNTB1Q13884 538 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 COTL1Q14019 142 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMEM132BQ14DG7 1078 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 PCBP1Q15365 356 aaKnown RBP eCLIP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SPHARQ15513 63 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 HFEQ30201 348 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 PAN3Q58A45 887 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF628Q5EBL2 1059 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 XKR7Q5GH72 579 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 NKAPLQ5M9Q1 402 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 CELF3Q5SZQ8 465 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 TSTD2Q5T7W7 516 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF385CQ66K41 422 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 NCBP2-AS2Q69YL0 99 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR4F3Q6IEY1 312 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 PRR5LQ6MZQ0 368 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 MRNIPQ6NTE8 343 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 FAM180BQ6P0A1 224 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 LCLAT1Q6UWP7 414 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 C17orf107Q6ZR85 190 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 GALNT5Q7Z7M9 940 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SERPINA11Q86U17 422 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 LRRC28Q86X40 367 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 CFAP206Q8IYR0 622 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF567Q8N184 647 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 KLHL36Q8N4N3 616 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SPICQ8N5J4 248 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 C7orf57Q8NEG2 295 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ATP6V1C2Q8NEY4 427 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 DNERQ8NFT8 737 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 NLGN4YQ8NFZ3 816 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR52K1Q8NGK4 314 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR2T35Q8NGX2 323 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SPATA22Q8NHS9 363 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ADAMTS19Q8TE59 1207 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 GLYATL2Q8WU03 294 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SMAP2Q8WU79 429 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC5A11Q8WWX8 675 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 GTF3AQ92664 365 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 GGHQ92820 318 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 UPRTQ96BW1 309 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 PYCR2Q96C36 320 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 RNF31Q96EP0 1072 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 MRPL48Q96GC5 212 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZC3H10Q96K80 434 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 C3orf30Q96M34 536 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF583Q96ND8 569 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF599Q96NL3 588 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 FCRL3Q96P31 734 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR4K3Q96R72 315 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 UBL7Q96S82 380 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 PFDN5Q99471 154 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 TSNAXQ99598 290 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 WDR18Q9BV38 432 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 EDEM2Q9BV94 578 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRIM62Q9BVG3 475 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 PAPOLGQ9BWT3 736 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 C1QTNF3Q9BXJ4 246 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 BCO2Q9BYV7 579 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC29A3Q9BZD2 475 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 TWSG1Q9GZX9 223 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 OSBPL2Q9H1P3 480 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC38A1Q9H2H9 487 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 IKZF4Q9H2S9 585 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 GHITMQ9H3K2 345 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMPRSS5Q9H3S3 457 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 MTG2Q9H4K7 406 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 QTRT2Q9H974 415 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 CHMP1AQ9HD42 196 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZFP64Q9NPA5 681 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC52A3Q9NQ40 469 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 NIT2Q9NQR4 276 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 C19orf12Q9NSK7 152 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 GFOD1Q9NXC2 390 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 MIOSQ9NXC5 875 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 THUMPD1Q9NXG2 353 aaKnown RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 MUTYHQ9UIF7 546 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 KLF15Q9UIH9 416 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 BTNL2Q9UIR0 455 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF490Q9ULM2 529 aaPredicted RBP5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 RNF112Q9ULX5 631 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 CLEC4AQ9UMR7 237 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 BCS1LQ9Y276 419 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 MED16Q9Y2X0 877 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 PCDHB11Q9Y5F2 797 aa5.39□□□□□ -1.55
VTI1BP4-201ENST00000427516 A0A096LPI6 279 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TEX13CA0A0J9YWL9 993 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMEM218A2RU14 115 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR14I1A6ND48 311 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 LACTBL1A8MY62 500 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TISP43B9A030 160 aa5.38□□□□□ -1.55
VTI1BP4-201ENST00000427516 TSTD3H0UI37 97 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms