RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CROCCQ5TZA2 2017 aa4.84□□□□□ -1.64
LINC00458-202ENST00000427299 ARHGEF37A1IGU5 675 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 RGSL1A5PLK6 1076 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 OR6C68A6NDL8 312 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CXorf65A6NEN9 183 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 NPIPB15A6NHN6 443 aaPredicted RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 EIF4E1BA6NMX2 242 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 E9PBE3 544 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 H7C0S8 307 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CYB561D2O14569 222 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CXCL11O14625 94 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 TNFSF14O43557 240 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 DENRO43583 198 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 UGT1A9O60656 530 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 KLHL41O60662 606 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 HUS1O60921 280 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 RNASEH1O60930 286 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 NOL3O60936 208 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 LYPLA1O75608 230 aaPredicted RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 PIAS1O75925 651 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ANXA9O76027 345 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 PDE5AO76074 875 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 SRP72O76094 671 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 DDHD2O94830 711 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 VAPBO95292 243 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 DDAH2O95865 285 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 FAM58BPP0C7Q3 252 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 FAM200BP0CF97 657 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 HSPA8P11142 646 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 FCGR1AP12314 374 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 GOT1P17174 413 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 PSMC3P17980 439 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CYP3A5P20815 502 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ME2P23368 584 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 WARSP23381 471 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 IL4RP24394 825 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ACSL1P33121 698 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 HCAR3P49019 387 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 RPL14P50914 215 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ATP4BP51164 291 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 TKTL1P51854 596 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 RPS3AP61247 264 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ADIGQ0VDE8 80 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 Q0VFX4 171 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 STX5Q13190 355 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 PPIL2Q13356 520 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 DCTN2Q13561 401 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 VGLL4Q14135 290 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CA9Q16790 459 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 USP41Q3LFD5 358 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 DUSP28Q4G0W2 176 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 TCHHL1Q5QJ38 904 aaPredicted RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 BSPRYQ5W0U4 402 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 KRT80Q6KB66 452 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 LRRC8EQ6NSJ5 796 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 RPUSD3Q6P087 351 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 PMF1Q6P1K2 205 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 KLHL24Q6TFL4 600 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 B3GNT6Q6ZMB0 384 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CATSPER4Q7RTX7 472 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ACOT1Q86TX2 421 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 TMEM135Q86UB9 458 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 KBTBD6Q86V97 674 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 SNX32Q86XE0 403 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ERO1BQ86YB8 467 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 GPSM1Q86YR5 675 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 SLC22A9Q8IVM8 553 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CNTN4Q8IWV2 1026 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF567Q8N184 647 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 DCLK2Q8N568 766 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ATPAF2Q8N5M1 289 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 SLC25A41Q8N5S1 370 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CPSF7Q8N684 471 aaKnown RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF781Q8N8C0 355 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CCNYQ8ND76 341 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 URGCPQ8TCY9 931 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 PGAP3Q96FM1 320 aaPredicted RBP4.83□□□□□ -1.64
LINC00458-202ENST00000427299 FAM210AQ96ND0 272 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 AGAP3Q96P47 875 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 OSBPL11Q9BXB4 747 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 NUF2Q9BZD4 464 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 DRC3Q9H069 523 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 COG4Q9H9E3 785 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 WDR41Q9HAD4 459 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 EFCAB1Q9HAE3 211 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 UGT1A7Q9HAW7 530 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 UGT1A10Q9HAW8 530 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 UGT1A8Q9HAW9 530 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 PLAC1Q9HBJ0 212 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 LRRC4Q9HBW1 653 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 PNPLA3Q9NST1 481 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 GDAP2Q9NXN4 497 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 NLKQ9UBE8 527 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 AP4B1Q9Y6B7 739 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CHD5Q8TDI0 1954 aa4.83□□□□□ -1.64
LINC00458-202ENST00000427299 CASP8AP2Q9UKL3 1982 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 NRCAMQ92823 1304 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
LINC00458-202ENST00000427299 HEATR9A2RTY3 570 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms