RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 ANK2Q01484 3957 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 SYNDIG1LA6NDD5 238 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 AP3B1O00203 1094 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 CASKO14936 926 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 CCL3P10147 92 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 PPP2R1BP30154 601 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 HNF4AP41235 474 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 ZNF136P52737 540 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 HK2P52789 917 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 WNT3P56703 355 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 RAB8AP61006 207 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 BMPR2Q13873 1038 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 SF3B4Q15427 424 aaKnown RBP eCLIP13.08□□□□□ -0.328e-7■■■■□ 21.6
HDAC6-206ENST00000426196 SPA17Q15506 151 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 POMZP3Q6PJE2 187 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 AGTRAPQ6RW13 159 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 OPN5Q6U736 354 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 PIWIL4Q7Z3Z4 852 aaKnown RBP13.08□□□□□ -0.32
HDAC6-206ENST00000426196 CNGA4Q8IV77 575 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 SCUBE1Q8IWY4 988 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 CA13Q8N1Q1 262 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 NEIL3Q8TAT5 605 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 SREK1Q8WXA9 508 aaKnown RBP13.08□□□□□ -0.32
HDAC6-206ENST00000426196 ATG4AQ8WYN0 398 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 KCNJ9Q92806 393 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 KIAA1191Q96A73 305 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 PERPQ96FX8 193 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 SGPP1Q9BX95 441 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-206ENST00000426196 PRTFDC1Q9NRG1 225 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 INTS10Q9NVR2 710 aaKnown RBP13.08□□□□□ -0.32
HDAC6-206ENST00000426196 ZFP69BQ9UJL9 534 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 CLCA3PQ9Y6N3 262 aa13.08□□□□□ -0.32
HDAC6-206ENST00000426196 HEATR5AQ86XA9 2040 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 USF3Q68DE3 2245 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 C15orf38-AP3S2A0A0A6YYH1 394 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 SH3D21A4FU49 640 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 CLDN4O14493 209 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 OPRM1P35372 400 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 NPY2RP49146 381 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 KCNJ2P63252 427 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 SLC13A2Q13183 592 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 ELAVL1Q15717 326 aaKnown RBP13.07□□□□□ -0.32
HDAC6-206ENST00000426196 CES3Q6UWW8 571 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 CYHR1Q6ZMK1 362 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 MBOAT1Q6ZNC8 495 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 CILP2Q8IUL8 1156 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 PALM2Q8IXS6 379 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 UBL4BQ8N7F7 174 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 OR4K1Q8NGD4 311 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 TMEM158Q8WZ71 300 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 DAZLQ92904 295 aaKnown RBP13.07□□□□□ -0.32
HDAC6-206ENST00000426196 ISL2Q96A47 359 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 CCL19Q99731 98 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 KIFC1Q9BW19 673 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 EPB41L4BQ9H329 900 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 ACKR4Q9NPB9 350 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 PAK5Q9P286 719 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 DHRS7Q9Y394 339 aa13.07□□□□□ -0.32
HDAC6-206ENST00000426196 CTAGE9A4FU28 777 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 EIF3FO00303 357 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-206ENST00000426196 IFNA2P01563 188 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 IFNA16P05015 189 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 NPPBP16860 134 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 PAMP19021 973 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 CTSSP25774 331 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 AHRP35869 848 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 PIGAP37287 484 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 SCTRP47872 440 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 TRPC1P48995 793 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 HSD17B7P56937 341 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 CCZ1BP86790 482 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 CCZ1P86791 482 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-206ENST00000426196 TBL3Q12788 808 aaKnown RBP13.06□□□□□ -0.32
HDAC6-206ENST00000426196 KIAA0930Q6ICG6 404 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-206ENST00000426196 LRRC8EQ6NSJ5 796 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 HMBOX1Q6NT76 420 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 PODNL1Q6PEZ8 512 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 CENPUQ71F23 418 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 VSTM4Q8IW00 320 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 CPNE9Q8IYJ1 553 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 PM20D2Q8IYS1 436 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 GPATCH11Q8N954 259 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 CCDC89Q8N998 374 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 TC2NQ8N9U0 490 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 OR5L2Q8NGL0 311 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 GPR21Q99679 349 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 ZFP64Q9NPA5 681 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 EIF2B3Q9NR50 452 aaKnown RBP13.06□□□□□ -0.32
HDAC6-206ENST00000426196 QPCTLQ9NXS2 382 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 PDE10AQ9Y233 779 aa13.06□□□□□ -0.32
HDAC6-206ENST00000426196 MRPS33Q9Y291 106 aaKnown RBP13.06□□□□□ -0.32
HDAC6-206ENST00000426196 TCRBV7S2A1N4TA0A589 114 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 KDM4EB2RXH2 506 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-206ENST00000426196 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-206ENST00000426196 TGFBR3LH3BV60 316 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 NRDCO43847 1150 aa13.05□□□□□ -0.32
HDAC6-206ENST00000426196 ERN1O75460 977 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms