RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 REEP5Q00765 189 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
VEGFB-202ENST00000426086 KEAP1Q14145 624 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 DAZAP2Q15038 168 aaPredicted RBP12.52□□□□□ -0.41
VEGFB-202ENST00000426086 HYAL4Q2M3T9 481 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 RBM20Q5T481 1227 aaKnown RBP12.52□□□□□ -0.41
VEGFB-202ENST00000426086 WLSQ5T9L3 541 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 NDUFAF5Q5TEU4 345 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 ADGRD1Q6QNK2 874 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 GK5Q6ZS86 529 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 TMEM139Q8IV31 216 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 GPALPP1Q8IXQ4 340 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 ARMC2Q8NEN0 867 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 TNIP2Q8NFZ5 429 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 FAM222BQ8WU58 562 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 KIAA1191Q96A73 305 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 ATG4BQ9Y4P1 393 aa12.52□□□□□ -0.41
VEGFB-202ENST00000426086 MPDZO75970 2070 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 TRGV5A0A0B4J1U4 118 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 BMP5P22003 454 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 GABRB3P28472 473 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 AHRP35869 848 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 VPS41P49754 854 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 CDKN2DP55273 166 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 SKP1P63208 163 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 CDK16Q00536 496 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 SP140Q13342 867 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 SLC10A1Q14973 349 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 NIPAL1Q6NVV3 410 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 DRICH1Q6PGQ1 229 aaPredicted RBP12.51□□□□□ -0.41
VEGFB-202ENST00000426086 RTL4Q6ZR62 310 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 VWA5B2Q8N398 1253 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 FAM47BQ8NA70 645 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 LINC01560Q8TB33 94 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 SLC5A11Q8WWX8 675 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 SARAFQ96BY9 339 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 LINGO1Q96FE5 620 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 CSF3RQ99062 836 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 CCDC77Q9BR77 488 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 TSGA10Q9BZW7 698 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 SLC6A15Q9H2J7 730 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 LDAHQ9H6V9 325 aa12.51□□□□□ -0.41
VEGFB-202ENST00000426086 CLK4Q9HAZ1 481 aaKnown RBP12.51□□□□□ -0.41
VEGFB-202ENST00000426086 TRMT6Q9UJA5 497 aaKnown RBP12.51□□□□□ -0.41
VEGFB-202ENST00000426086 FLNAP21333 2647 aaKnown RBP12.5□□□□□ -0.41
VEGFB-202ENST00000426086 CLDN4O14493 209 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 NRDCO43847 1150 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 GUCA1CO95843 209 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 CD53P19397 219 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 HNRNPH1P31943 449 aaKnown RBP12.5□□□□□ -0.41
VEGFB-202ENST00000426086 ASCL1P50553 236 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 CCZ1BP86790 482 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 CCZ1P86791 482 aaPredicted RBP12.5□□□□□ -0.41
VEGFB-202ENST00000426086 KIF5AQ12840 1032 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 CSHL1Q14406 222 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 RBBP5Q15291 538 aaKnown RBP12.5□□□□□ -0.41
VEGFB-202ENST00000426086 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 ULK2Q8IYT8 1036 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 PTPMT1Q8WUK0 201 aaPredicted RBP12.5□□□□□ -0.41
VEGFB-202ENST00000426086 RNASE6Q93091 150 aaKnown RBP12.5□□□□□ -0.41
VEGFB-202ENST00000426086 EXO5Q9H790 373 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 PROK2Q9HC23 129 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 ADAP2Q9NPF8 381 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 SACM1LQ9NTJ5 587 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 C20orf96Q9NUD7 363 aaPredicted RBP12.5□□□□□ -0.41
VEGFB-202ENST00000426086 ARL15Q9NXU5 204 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 B4GALT7Q9UBV7 327 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 COMMD10Q9Y6G5 202 aa12.5□□□□□ -0.41
VEGFB-202ENST00000426086 HRNRQ86YZ3 2850 aaPredicted RBP12.49□□□□□ -0.41
VEGFB-202ENST00000426086 GOLGA8MH3BSY2 632 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 TBX6O95947 436 aaPredicted RBP12.49□□□□□ -0.41
VEGFB-202ENST00000426086 SERPINA6P08185 405 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 GABRA1P14867 456 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 PCSK6P29122 969 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 CEACAM8P31997 349 aaPredicted RBP12.49□□□□□ -0.41
VEGFB-202ENST00000426086 MAGEA6P43360 314 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 ZNF136P52737 540 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 HSD17B7P56937 341 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 RAB38P57729 211 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 DCAF7P61962 342 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 NKX6-1P78426 367 aaPredicted RBP12.49□□□□□ -0.41
VEGFB-202ENST00000426086 SLC13A2Q13183 592 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 BMPR2Q13873 1038 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 POU4F3Q15319 338 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 FBXL19-AS1Q494R0 122 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 HSP90AA5PQ58FG0 334 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 C4orf22Q6V702 233 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 HSDL2Q6YN16 418 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 TMPRSS11BQ86T26 416 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 CXorf67Q86X51 503 aaPredicted RBP12.49□□□□□ -0.41
VEGFB-202ENST00000426086 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.49□□□□□ -0.41
VEGFB-202ENST00000426086 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 GOLM1Q8NBJ4 401 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 NUDT8Q8WV74 236 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 FBXL8Q96CD0 374 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 QRFPRQ96P65 431 aa12.49□□□□□ -0.41
VEGFB-202ENST00000426086 ZNF703Q9H7S9 590 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms