RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 CNTN1Q12860 1018 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 ZNF146Q15072 292 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 AP1ARQ63HQ0 302 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 PODNL1Q6PEZ8 512 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 ZNF841Q6ZN19 808 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 MCM10Q7L590 875 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 SLC25A42Q86VD7 318 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 SLC47A2Q86VL8 602 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 HOOK3Q86VS8 718 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 RNF130Q86XS8 419 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 LYG1Q8N1E2 194 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 SLC43A2Q8N370 569 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 ZNF397Q8NF99 534 aaPredicted RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 GOT1L1Q8NHS2 421 aaPredicted RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 UBLCP1Q8WVY7 318 aaPredicted RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 SMPDL3AQ92484 453 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 SNX21Q969T3 373 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 SYAP1Q96A49 352 aaPredicted RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 BPIFA2Q96DR5 249 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 LURAP1Q96LR2 239 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 TSPAN18Q96SJ8 248 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 PARK7Q99497 189 aaKnown RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 PRMT1Q99873 361 aaKnown RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 ATG101Q9BSB4 218 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 DCTN5Q9BTE1 182 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 TEX13AQ9BXU3 409 aaPredicted RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 TRIM6Q9C030 488 aaPredicted RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 HEXA-AS1Q9H8Q6 139 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 IL1RAPQ9NPH3 570 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 CTSZQ9UBR2 303 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 CTNNA3Q9UI47 895 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 GTF3C4Q9UKN8 822 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 TMED7Q9Y3B3 224 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 SMAD5-AS1Q9Y6J3 95 aa2.59□□□□□ -1.99
HDAC2-202ENST00000425835 DDX49Q9Y6V7 483 aaKnown RBP2.59□□□□□ -1.99
HDAC2-202ENST00000425835 MTUS2Q5JR59 1369 aa2.59□□□□□ -2
HDAC2-202ENST00000425835 PLEKHG2Q9H7P9 1386 aa2.59□□□□□ -2
HDAC2-202ENST00000425835 KIF27Q86VH2 1401 aa2.59□□□□□ -2
HDAC2-202ENST00000425835 UACAQ9BZF9 1416 aa2.59□□□□□ -2
HDAC2-202ENST00000425835 SCAF11Q99590 1463 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 C2orf92A0A1B0GVN3 265 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 ERICH4A6NGS2 130 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 ANKDD1BA6NHY2 528 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 ACOD1A6NK06 481 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 TMCO5BA8MYB1 307 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 KIF2AO00139 706 aaPredicted RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 IFIT3O14879 490 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 INPP4BO15327 924 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 MBD3O95983 291 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 TPM1P09493 284 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 PCP11498 1178 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 CASTP20810 708 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 MAGEA9P43362 315 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 PEX3P56589 373 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 KRTAP10-5P60370 271 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 FKBP1BP68106 108 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 AKAP17AQ02040 695 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 MLF2Q15773 248 aaPredicted RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 CDC37Q16543 378 aaPredicted RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 ZNF239Q16600 458 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 ZSCAN26Q16670 478 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 UPP1Q16831 310 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 HSP90B2PQ58FF3 399 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 CCDC158Q5M9N0 1113 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 SIGLEC15Q6ZMC9 328 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 MSANTD1Q6ZTZ1 278 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 RFPL4BQ6ZWI9 263 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 TIPARPQ7Z3E1 657 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 CATSPER3Q86XQ3 398 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 TUSC5Q8IXB3 177 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 AQP12AQ8IXF9 295 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 POM121L12Q8N7R1 296 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 OR13C5Q8NGS8 318 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 GOLGA5Q8TBA6 731 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 SEPT8Q92599 483 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 SLC35C1Q96A29 364 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 ZNF274Q96GC6 653 aaPredicted RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 ADPGKQ9BRR6 497 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 IDI2Q9BXS1 227 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 PUS3Q9BZE2 481 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 CUEDC2Q9H467 287 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 TUBB1Q9H4B7 451 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 ZWILCHQ9H900 591 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 PLEKHA3Q9HB20 300 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 GTSE1Q9NYZ3 720 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.58□□□□□ -2
HDAC2-202ENST00000425835 GPR132Q9UNW8 380 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 MRPS18CQ9Y3D5 142 aaKnown RBP2.58□□□□□ -2
HDAC2-202ENST00000425835 CSAG2Q9Y5P2 127 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 STYXL1Q9Y6J8 313 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 SOGA1O94964 1423 aa2.58□□□□□ -2
HDAC2-202ENST00000425835 NOTCH3Q9UM47 2321 aa2.57□□□□□ -2
HDAC2-202ENST00000425835 ANHXE9PGG2 379 aa2.57□□□□□ -2
HDAC2-202ENST00000425835 TRAFD1O14545 582 aaPredicted RBP2.57□□□□□ -2
HDAC2-202ENST00000425835 PSMA7O14818 248 aa2.57□□□□□ -2
HDAC2-202ENST00000425835 TNFSF12O43508 249 aa2.57□□□□□ -2
HDAC2-202ENST00000425835 ATP8B1O43520 1251 aa2.57□□□□□ -2
HDAC2-202ENST00000425835 SCO2O43819 266 aa2.57□□□□□ -2
HDAC2-202ENST00000425835 NME6O75414 186 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms