RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GPR143P51810 404 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 SNRPNP63162 240 aaKnown RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 SIRPAP78324 504 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ABATP80404 500 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PRDX1Q06830 199 aaKnown RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PCDH1Q08174 1060 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 LOXL1Q08397 574 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 SLC13A2Q13183 592 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 GGTLC2Q14390 218 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 NRF1Q16656 503 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 CR1LQ2VPA4 569 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 KBTBD12Q3ZCT8 623 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ANKRD20A4Q4UJ75 823 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 TCP11X2Q5H9J9 407 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ANKRD20A2Q5SQ80 823 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ANKRD20A1Q5TYW2 823 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ANKRD20A3Q5VUR7 823 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PACS1Q6VY07 963 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 QSOX2Q6ZRP7 698 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 BZW1Q7L1Q6 419 aaKnown RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 CHMP1BQ7LBR1 199 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 MILR1Q7Z6M3 343 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 LDB1Q86U70 411 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PDSS2Q86YH6 399 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 CCDC50Q8IVM0 306 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PIANPQ8IYJ0 282 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 KRT222Q8N1A0 295 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ARHGEF39Q8N4T4 335 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PLD5Q8N7P1 536 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 NIPA2Q8N8Q9 360 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PPFIBP2Q8ND30 876 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 OR5L2Q8NGL0 311 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 HMGCLL1Q8TB92 370 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ENOX1Q8TC92 643 aaKnown RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 SMAP2Q8WU79 429 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 SLC13A3Q8WWT9 602 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ABTB1Q969K4 478 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PGM2Q96G03 612 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PDLIM2Q96JY6 352 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF597Q96LX8 424 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 CCDC138Q96M89 665 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PANX2Q96RD6 677 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 FERMT1Q9BQL6 677 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 TACO1Q9BSH4 297 aaKnown RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PRDM14Q9GZV8 571 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 OPN3Q9H1Y3 402 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ADAP2Q9NPF8 381 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 NECTIN3Q9NQS3 549 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 QPCTLQ9NXS2 382 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ELOVL5Q9NYP7 299 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ZFATQ9P243 1243 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PCDHGB1Q9Y5G3 927 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 CLCA3PQ9Y6N3 262 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 DYSFO75923 2080 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ARHGAP21Q5T5U3 1957 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 TRBV5-4A0A0C4DH59 114 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 IGKV1-8A0A0C4DH67 115 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 OR51F1A6NGY5 319 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 C3orf70A6NLC5 250 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 FAM157AC9JC47 383 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 TGFBR3LH3BV60 316 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 TRIM77I1YAP6 450 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 GFYI3L273 518 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 NDUFS4O43181 175 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 RCBTB2O95199 551 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 SERPINC1P01008 464 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 KRT1P04264 644 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 SOD3P08294 240 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 RNH1P13489 461 aaKnown RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 TNNT1P13805 278 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 CHRM3P20309 590 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 USF1P22415 310 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 KDELR1P24390 212 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 PPARGP37231 505 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 PNLIPRP1P54315 467 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 TBL3Q12788 808 aaKnown RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 ITPRIPL1Q6GPH6 555 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF425Q6IV72 752 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 SHISA2Q6UWI4 295 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF567Q8N184 647 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 LRRC25Q8N386 305 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 TC2NQ8N9U0 490 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 MLKLQ8NB16 471 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 PPHLN1Q8NEY8 458 aaKnown RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 OR9A1PQ8NGU1 263 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 ZFAND2BQ8WV99 257 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 IGFBPL1Q8WX77 278 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 RAPGEF5Q92565 580 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 FAM168AQ92567 244 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 ALKBH8Q96BT7 664 aaKnown RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 MRFAP1L1Q96HT8 127 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 TUBA1CQ9BQE3 449 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 UGT2B28Q9BY64 529 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 OR8D2Q9GZM6 311 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 FAM114A2Q9NRY5 505 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 FAIMQ9NVQ4 179 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 NLE1Q9NVX2 485 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-203ENST00000424270 COPS7AQ9UBW8 275 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 ANAPC5Q9UJX4 755 aa5.76□□□□□ -1.49
SDCBP-203ENST00000424270 ZNF223Q9UK11 482 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms