RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PYCR2Q96C36 320 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 C18orf12Q96KH6 178 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 SH3GL2Q99962 352 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 CCDC77Q9BR77 488 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 RHBGQ9H310 441 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 KLHL31Q9H511 634 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 ADAP2Q9NPF8 381 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 SAMD15Q9P1V8 674 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 TRMT6Q9UJA5 497 aaKnown RBP9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 FBXO5Q9UKT4 447 aa9.45□□□□□ -0.9
TNFAIP3-202ENST00000420009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 URADA6NGE7 173 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 HAUS5O94927 633 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 INHBBP09529 407 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 GABRA1P14867 456 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 CNR1P21554 472 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 UQCRC1P31930 480 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 HNF4AP41235 474 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 MAN2A2P49641 1150 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 HNRNPFP52597 415 aaKnown RBP9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 HK2P52789 917 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 AP1S2P56377 157 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 HSD17B7P56937 341 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 DAZAP2Q15038 168 aaPredicted RBP9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 WLSQ5T9L3 541 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 HECTD2Q5U5R9 776 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 ANKRD22Q5VYY1 191 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 SEM1Q6ZVN7 128 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 Q71RC1 249 aaPredicted RBP9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 GSTA5Q7RTV2 222 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 TMEM139Q8IV31 216 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 MYO1HQ8N1T3 1032 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 TMEM52Q8NDY8 209 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 TRPV3Q8NET8 790 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 RNASE6Q93091 150 aaKnown RBP9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 SARAFQ96BY9 339 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 FBXL8Q96CD0 374 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 LINGO1Q96FE5 620 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 SCYL1Q96KG9 808 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 SGCZQ96LD1 299 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 NDNQ99608 321 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 DESI2Q9BSY9 194 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 CNPPD1Q9BV87 410 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 LIN28AQ9H9Z2 209 aaKnown RBP9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 PNO1Q9NRX1 252 aaKnown RBP9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 SPRR3Q9UBC9 169 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 ACAD8Q9UKU7 415 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZKSCAN5Q9Y2L8 839 aa9.44□□□□□ -0.9
TNFAIP3-202ENST00000420009 ATP6AP2A0A1C7CYW4 349 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 MAGEB16A2A368 324 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 WWP2O00308 870 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 HCN1O60741 890 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZNF354AO60765 605 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ATP6AP2O75787 350 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 HEXAP06865 529 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 SERPINA6P08185 405 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 HIST1H2AGP0C0S8 130 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 MLNP12872 115 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 HIST1H2ADP20671 130 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ADSLP30566 484 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 MAGEA3P43357 314 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 KCNJ1P48048 391 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 DNASE1L1P49184 302 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ASCL1P50553 236 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 SARNPP82979 210 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 RUNX2Q13950 521 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 CSHL1Q14406 222 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ELAVL1Q15717 326 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZNF750Q32MQ0 723 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 TOR1AIP1Q5JTV8 583 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 TMEM198Q66K66 360 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 UGT3A1Q6NUS8 523 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 PAQR3Q6TCH7 311 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 HSDL2Q6YN16 418 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 PRIMA1Q86XR5 153 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 PALM2Q8IXS6 379 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 AGGF1Q8N302 714 aaeCLIP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 TXLNBQ8N3L3 684 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 RNF10Q8N5U6 811 aaKnown RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 NAXEQ8NCW5 288 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 CALML6Q8TD86 181 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 GAL3ST3Q96A11 431 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 HIST1H2AHQ96KK5 128 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 TSNARE1Q96NA8 513 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 MDFIQ99750 246 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 HIST1H2AJQ99878 128 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 H2AFJQ9BTM1 129 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 NPLQ9BXD5 320 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ZNF703Q9H7S9 590 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 PLEKHF2Q9H8W4 249 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 PELI2Q9HAT8 420 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 SEMA4BQ9NPR2 832 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 PRTFDC1Q9NRG1 225 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 C20orf96Q9NUD7 363 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ARL15Q9NXU5 204 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 TUBA8Q9NY65 449 aaPredicted RBP9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 TAS2R13Q9NYV9 303 aa9.43□□□□□ -0.9
TNFAIP3-202ENST00000420009 ATG4BQ9Y4P1 393 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms