RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TMEM9Q9P0T7 183 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 PHF11Q9UIL8 331 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 DAPP1Q9UN19 280 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 ACACBO00763 2458 aa13.52□□□□□ -0.25
SHMT1P1-201ENST00000419974 C15orf38-AP3S2A0A0A6YYH1 394 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 PRSS51A0A1B0GVH4 220 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 C1orf226A1L170 272 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 PCNX2A6NKB5 2137 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 H0YIG0 161 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 RTCAO00442 366 aaKnown RBP13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 NR5A2O00482 541 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 MRASO14807 208 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 SH3BP5O60239 455 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 NSA2O95478 260 aaKnown RBP13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ZCCHC18P0CG32 403 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 PIM1P11309 404 aaPredicted RBP13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ITGAXP20702 1163 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 CCKBRP32239 447 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 NME5P56597 212 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 WNT3P56703 355 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 PHC1P78364 1004 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 SLAMF1Q13291 335 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 MAPKAPK3Q16644 382 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 TRMT5Q32P41 509 aaKnown RBP13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 MMEL1Q495T6 779 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 CPTPQ5TA50 214 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 TMPRSS9Q7Z410 1059 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ARPINQ7Z6K5 226 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 SAMD14Q8IZD0 417 aaPredicted RBP13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 C7orf57Q8NEG2 295 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 VPS37AQ8NEZ2 397 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ADAMTS18Q8TE60 1221 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ZNF501Q96CX3 271 aaPredicted RBP13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ITCHQ96J02 903 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 CCDC115Q96NT0 180 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR52E6Q96RD3 313 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 GFM1Q96RP9 751 aaKnown RBP13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 SERHLQ9NQF3 203 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 SOHLH2Q9NX45 425 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 SERTAD3Q9UJW9 196 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ANGPTL2Q9UKU9 493 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 AP3M1Q9Y2T2 418 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 PCDHA9Q9Y5H5 950 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 ADAMTS9Q9P2N4 1935 aa13.51□□□□□ -0.25
SHMT1P1-201ENST00000419974 TRBV5-3A0A0A0MS03 114 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 TMX2-CTNND1H3BSU7 103 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 FXYD1O00168 92 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 AIM2O14862 343 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 B3GALT2O43825 422 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 SH3BGRLO75368 114 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 ONECUT2O95948 504 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 IL3P08700 152 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 IFI6P09912 130 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 COX7A2P14406 83 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 HOXB9P17482 250 aaPredicted RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 PTPN6P29350 595 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 ARL4DP49703 201 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 NUDT2P50583 147 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 NOVA1P51513 510 aaKnown RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 ARSFP54793 590 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 PCBP4P57723 403 aaKnown RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 BTN3A2P78410 334 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 C2orf80Q0P641 193 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 MUM1Q2TAK8 710 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 TIGD2Q4W5G0 525 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 NDUFAF5Q5TEU4 345 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 PGM2L1Q6PCE3 622 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 FAM47BQ8NA70 645 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 PSMA8Q8TAA3 256 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 VPS33AQ96AX1 596 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 LRRC58Q96CX6 371 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 C10orf90Q96M02 699 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 MACROD1Q9BQ69 325 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 DUSP26Q9BV47 211 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 SORBS1Q9BX66 1292 aaKnown RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 CADM1Q9BY67 442 aaKnown RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 COPS7BQ9H9Q2 264 aaPredicted RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 FANCEQ9HB96 536 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 ACSS1Q9NUB1 689 aaPredicted RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 SIDT1Q9NXL6 827 aaKnown RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 ABCD2Q9UBJ2 740 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 CES1P1Q9UKY3 287 aa13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 SNRNP200O75643 2136 aaKnown RBP13.5□□□□□ -0.25
SHMT1P1-201ENST00000419974 A0A096LPI6 279 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 A0A1W2PR48 441 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 HYKKA2RU49 373 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 DKK1O94907 266 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 LAMP1P11279 417 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 FOLR1P15328 257 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 IL10P22301 178 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 BUD31P41223 144 aaPredicted RBP13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 DGKQP52824 942 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 LIM2P55344 173 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 ITGA1P56199 1179 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 RAB8AP61006 207 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 SPIDRQ14159 915 aa13.49□□□□□ -0.25
SHMT1P1-201ENST00000419974 IL11RAQ14626 422 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms