RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 TICAM1Q8IUC6 712 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 SLC15A3Q8IY34 581 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 ARHGAP24Q8N264 748 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 FBXW8Q8N3Y1 598 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 FAM47BQ8NA70 645 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 ZCCHC10Q8TBK6 192 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 UCN3Q969E3 161 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 PPCDCQ96CD2 204 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 ITCHQ96J02 903 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 CGREF1Q99674 301 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 PRRX2Q99811 253 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 DPYSL5Q9BPU6 564 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 INPP5KQ9BT40 448 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 NLNQ9BYT8 704 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 RMND5AQ9H871 391 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 SPAG4Q9NPE6 437 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 EHD3Q9NZN3 535 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 VAPAQ9P0L0 249 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 SH3BP4Q9P0V3 963 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 CD300AQ9UGN4 299 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 BTNL2Q9UIR0 455 aa13.07□□□□□ -0.32
CHMP5-202ENST00000419016 RNASET2O00584 256 aaKnown RBP13.06□□□□□ -0.32
CHMP5-202ENST00000419016 NTN3O00634 580 aaPredicted RBP13.06□□□□□ -0.32
CHMP5-202ENST00000419016 GALR3O60755 368 aaPredicted RBP13.06□□□□□ -0.32
CHMP5-202ENST00000419016 DNAJB6O75190 326 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 KCNH1O95259 989 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 CKMT2P17540 419 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 ACP1P24666 158 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 TRPC1P48995 793 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 EMP3P54852 163 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 RUNX2Q13950 521 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 KCNAB1Q14722 419 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 OTOGLQ3ZCN5 2332 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 TCTE1Q5JU00 501 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 ANXA8L1Q5VT79 327 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 NANOGP8Q6NSW7 305 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 ANKRD46Q86W74 232 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 EFCAB3Q8N7B9 438 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 TMEM125Q96AQ2 219 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 C10orf90Q96M02 699 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 PHF12Q96QT6 1004 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 NANOGQ9H9S0 305 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 ATAD3AQ9NVI7 634 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 LYARQ9NX58 379 aaKnown RBP13.06□□□□□ -0.32
CHMP5-202ENST00000419016 CMTM6Q9NX76 183 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 CES1P1Q9UKY3 287 aa13.06□□□□□ -0.32
CHMP5-202ENST00000419016 COL5A1P20908 1838 aaPredicted RBP13.06□□□□□ -0.32
CHMP5-202ENST00000419016 NME4O00746 187 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 GUCY1B2O75343 617 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 SORBS2O94875 1100 aaKnown RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 FRKP42685 505 aaPredicted RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 CDKN2CP42773 168 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 GCGRP47871 477 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 SEPHS1P49903 392 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 SLC7A2P52569 658 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 ELF3P78545 371 aaPredicted RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 DAB2P98082 770 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 PLIN5Q00G26 463 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 MUM1Q2TAK8 710 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 GARNL3Q5VVW2 1013 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 HPS6Q86YV9 775 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 CLECL1Q8IZS7 167 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 GOT1L1Q8NHS2 421 aaPredicted RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 CNDP2Q96KP4 475 aaKnown RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 ANKRD27Q96NW4 1050 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 MAPKAP1Q9BPZ7 522 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 COPS7BQ9H9Q2 264 aaPredicted RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 LYRM4Q9HD34 91 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 DAPP1Q9UN19 280 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 PCDHB14Q9Y5E9 798 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 CUL9Q8IWT3 2517 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 IGHV5-10-1A0A0J9YXX1 117 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 PRORSD1PA6NEY8 169 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 PGRMC2O15173 223 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 MAP3K7O43318 606 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 FOXS1O43638 330 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 PDE5AO76074 875 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 LDOC1O95751 146 aaPredicted RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 AIFM1O95831 613 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 GP1BAP07359 652 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 FOLR1P15328 257 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 ZNF10P21506 573 aaPredicted RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 TGM1P22735 817 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 LIM2P55344 173 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 PCBP4P57723 403 aaKnown RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 LRRC74AQ0VAA2 488 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 FAM53BQ14153 422 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 RUNDC3AQ59EK9 446 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 SNAP47Q5SQN1 464 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 C6orf10Q5SRN2 563 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 DNAJB14Q8TBM8 379 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 CIDECQ96AQ7 238 aaPredicted RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 FAIM2Q9BWQ8 316 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 TRIM4Q9C037 500 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 SPRTNQ9H040 489 aaPredicted RBP13.05□□□□□ -0.32
CHMP5-202ENST00000419016 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 PRDM9Q9NQV7 894 aa13.05□□□□□ -0.32
CHMP5-202ENST00000419016 PACSIN3Q9UKS6 424 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms