RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 RNF13O43567 381 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 SYT7O43581 403 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 OR1F1O43749 312 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 DFNA5O60443 496 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 ALPIP09923 528 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 CT45A8P0DMV1 189 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 CT45A9P0DMV2 189 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 NT5EP21589 574 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 COMTP21964 271 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 RPS5P46782 204 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 VAMP7P51809 220 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 MAZP56270 477 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 RPS15P62841 145 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 CTAG1AP78358 180 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 XIAPP98170 497 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 EEF1A2Q05639 463 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 ENPEPQ07075 957 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 NCBP1Q09161 790 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 NFATC2Q13469 925 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 EXOSC7Q15024 291 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 WDR43Q15061 677 aaKnown RBP eCLIP3.99□□□□□ -1.77
RFC4-205ENST00000418288 ZRSR1Q15695 479 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 Q3ZCU0 254 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 CT45A2Q5DJT8 189 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 ARMCX4Q5H9R4 360 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 CTSL3PQ5NE16 218 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 LIPJQ5W064 366 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 PDPK2PQ6A1A2 396 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 DEGS2Q6QHC5 323 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 BLOC1S2Q6QNY1 142 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 SLC29A4Q7RTT9 530 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 COMTD1Q86VU5 262 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 PAQR7Q86WK9 346 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 CHERPQ8IWX8 916 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 CD302Q8IX05 232 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 ADGRF4Q8IZF3 695 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 MUC20Q8N307 709 aaPredicted RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 CPSF7Q8N684 471 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 COLGALT1Q8NBJ5 622 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 BHLHE22Q8NFJ8 381 aaPredicted RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 OR13J1Q8NGT2 312 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 SPRYD4Q8WW59 207 aaPredicted RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 FAM168AQ92567 244 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 SEMA4DQ92854 862 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 RPL3LQ92901 407 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 HAVCR1Q96D42 359 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 RBM41Q96IZ5 413 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 RITA1Q96K30 269 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 C8orf76Q96K31 380 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 FAM84BQ96KN1 310 aaPredicted RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 SGK494Q96LW2 274 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 LZTS2Q9BRK4 669 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 TDRD1Q9BXT4 1180 aaKnown RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 NACA2Q9H009 215 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 DNTTIP1Q9H147 329 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 AAMDCQ9H7C9 122 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 TMEM185BQ9H7F4 350 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 SLC52A3Q9NQ40 469 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 ZNF701Q9NV72 531 aaPredicted RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 UBAP1Q9NZ09 502 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 PDP1Q9P0J1 537 aaPredicted RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 PIPOXQ9P0Z9 390 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 LHX3Q9UBR4 397 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 CDH9Q9ULB4 789 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 ZNF490Q9ULM2 529 aaPredicted RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 PACSIN2Q9UNF0 486 aaPredicted RBP3.99□□□□□ -1.77
RFC4-205ENST00000418288 ST3GAL5Q9UNP4 418 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 PIGLQ9Y2B2 252 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 C15orf41Q9Y2V0 281 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 KCTD3Q9Y597 815 aa3.99□□□□□ -1.77
RFC4-205ENST00000418288 LOC105371242A0A075B767 164 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 A0A087WUV0 522 aaPredicted RBP3.98□□□□□ -1.77
RFC4-205ENST00000418288 TRAV25A0A0B4J276 109 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 A0A0G2JLL6 359 aaPredicted RBP3.98□□□□□ -1.77
RFC4-205ENST00000418288 ATP6AP2A0A1C7CYW4 349 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 CCDC162PA2VCL2 907 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 SNTNA6NMZ2 147 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 NPIPB6E9PJ23 425 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 HAS3O00219 553 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 ZIC3O60481 467 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 NDUFS7O75251 213 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 TRIM3O75382 744 aaPredicted RBP3.98□□□□□ -1.77
RFC4-205ENST00000418288 TXNDC12O95881 172 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 CRYGBP07316 175 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 GP9P14770 177 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 ANPEPP15144 967 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 PRKACAP17612 351 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 BMP7P18075 431 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 SRMP19623 302 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 ANXA13P27216 316 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 NMT1P30419 496 aaKnown RBP3.98□□□□□ -1.77
RFC4-205ENST00000418288 FDFT1P37268 417 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 CSNK1EP49674 416 aaKnown RBP3.98□□□□□ -1.77
RFC4-205ENST00000418288 NAPAP54920 295 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 GEMP55040 296 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 MYBPHQ13203 477 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 CUL1Q13616 776 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 TMEM132DQ14C87 1099 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 SPHARQ15513 63 aa3.98□□□□□ -1.77
RFC4-205ENST00000418288 ALKBH6Q3KRA9 238 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms