RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CPSF7Q8N684 471 aaKnown RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 ITLN2Q8WWU7 325 aaPredicted RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 SREK1Q8WXA9 508 aaKnown RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 NCLNQ969V3 563 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 CCDC120Q96HB5 630 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 SEC16BQ96JE7 1060 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 C16orf45Q96MC5 204 aaPredicted RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 SERINC2Q96SA4 455 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 EFCAB11Q9BUY7 163 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 SORBS1Q9BX66 1292 aaKnown RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 NPLQ9BXD5 320 aaPredicted RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 TRIM45Q9H8W5 580 aaPredicted RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 PNO1Q9NRX1 252 aaKnown RBP14.09□□□□□ -0.15
UBXN4-203ENST00000416538 NINJ2Q9NZG7 142 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 KCMF1Q9P0J7 381 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 TINAGQ9UJW2 476 aa14.09□□□□□ -0.15
UBXN4-203ENST00000416538 TRGV8A0A0C4DH27 118 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 A0A1B0GUH1 482 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 ANKDD1BA6NHY2 528 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 TMEM200CA6NKL6 621 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 ALDOAP04075 364 aaKnown RBP14.08□□□□□ -0.16
UBXN4-203ENST00000416538 LTA4HP09960 611 aaKnown RBP14.08□□□□□ -0.16
UBXN4-203ENST00000416538 CD46P15529 392 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 EEF1DP29692 281 aaKnown RBP14.08□□□□□ -0.16
UBXN4-203ENST00000416538 TRHRP34981 398 aaPredicted RBP14.08□□□□□ -0.16
UBXN4-203ENST00000416538 CASP2P42575 452 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 MTTPP55157 894 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 PER3P56645 1201 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 HSD17B7P56937 341 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 IRF8Q02556 426 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 NAB1Q13506 487 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 TERF2Q15554 542 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 TBCCQ15814 346 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 C3AR1Q16581 482 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 FAM219BQ5XKK7 198 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 C8orf74Q6P047 294 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 NCCRP1Q6ZVX7 275 aaPredicted RBP14.08□□□□□ -0.16
UBXN4-203ENST00000416538 RAPH1Q70E73 1250 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 FGD2Q7Z6J4 655 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.08□□□□□ -0.16
UBXN4-203ENST00000416538 LAS2Q8IYD9 372 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 ZNF321PQ8N8H1 164 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 NOA1Q8NC60 698 aaKnown RBP14.08□□□□□ -0.16
UBXN4-203ENST00000416538 STAG3L4Q8TBR4 150 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 FAR2Q96K12 515 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 GPR137Q96N19 417 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 GPR78Q96P69 363 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 MAPKAP1Q9BPZ7 522 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 CAPS2Q9BXY5 557 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 SNX15Q9NRS6 342 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 MYO9AB2RTY4 2548 aa14.08□□□□□ -0.16
UBXN4-203ENST00000416538 NPIPA5E9PKD4 350 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 K7EPI3 171 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 SLC19A2O60779 497 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 SCELO95171 688 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 S100BP04271 92 aaPredicted RBP14.07□□□□□ -0.16
UBXN4-203ENST00000416538 C2P06681 752 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 FREM3P0C091 2139 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 ATP5A1P25705 553 aaKnown RBP14.07□□□□□ -0.16
UBXN4-203ENST00000416538 GRNP28799 593 aaKnown RBP14.07□□□□□ -0.16
UBXN4-203ENST00000416538 CRABP2P29373 138 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 ECHS1P30084 290 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 HLCSP50747 726 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 NR0B1P51843 470 aaKnown RBP14.07□□□□□ -0.16
UBXN4-203ENST00000416538 ADORA2A-AS1P86434 159 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 ID2Q02363 134 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 PCDH1Q08174 1060 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 SLC13A2Q13183 592 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 CDSNQ15517 529 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 MROH9Q5TGP6 573 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 SLC25A25Q6KCM7 469 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 TBC1D1Q86TI0 1168 aaPredicted RBP14.07□□□□□ -0.16
UBXN4-203ENST00000416538 PLD6Q8N2A8 252 aaKnown RBP14.07□□□□□ -0.16
UBXN4-203ENST00000416538 TMEM178AQ8NBL3 297 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 ARMC2Q8NEN0 867 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 OR7G3Q8NG95 312 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 DEFB126Q9BYW3 111 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 LIN28AQ9H9Z2 209 aaKnown RBP14.07□□□□□ -0.16
UBXN4-203ENST00000416538 NMRAL1Q9HBL8 299 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 ADAP2Q9NPF8 381 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 DMGDHQ9UI17 866 aaKnown RBP14.07□□□□□ -0.16
UBXN4-203ENST00000416538 NPIPA1Q9UND3 350 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 ZNF835Q9Y2P0 537 aa14.07□□□□□ -0.16
UBXN4-203ENST00000416538 CREBBPQ92793 2442 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 A0A0G2JMM0 328 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 A0A1W2PPB8 328 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 A0A1W2PRS3 328 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 KIR3DP1A8MWS1 328 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 SAP18O00422 153 aaKnown RBP14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ZNF354AO60765 605 aaPredicted RBP14.06□□□□□ -0.16
UBXN4-203ENST00000416538 LDB3O75112 727 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ITGA10O75578 1167 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 TGFB1P01137 390 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 PCNAP12004 261 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 PRF1P14222 555 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 RFC3P40938 356 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 CYB561P49447 251 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 CLCN2P51788 898 aa14.06□□□□□ -0.16
UBXN4-203ENST00000416538 ALDH6A1Q02252 535 aaKnown RBP14.06□□□□□ -0.16
UBXN4-203ENST00000416538 NAA30Q147X3 362 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms