RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CAMK1GQ96NX5 476 aa11.07□□□□□ -0.64
RFFL-205ENST00000415395 KIR3DX1Q9H7L2 352 aa11.07□□□□□ -0.64
RFFL-205ENST00000415395 KAT8Q9H7Z6 458 aaKnown RBP11.07□□□□□ -0.64
RFFL-205ENST00000415395 PELI2Q9HAT8 420 aa11.07□□□□□ -0.64
RFFL-205ENST00000415395 TM9SF3Q9HD45 589 aa11.07□□□□□ -0.64
RFFL-205ENST00000415395 FARSBQ9NSD9 589 aaKnown RBP11.07□□□□□ -0.64
RFFL-205ENST00000415395 PPT2Q9UMR5 302 aa11.07□□□□□ -0.64
RFFL-205ENST00000415395 FANCMQ8IYD8 2048 aa11.07□□□□□ -0.64
RFFL-205ENST00000415395 CEP192Q8TEP8 1941 aa11.07□□□□□ -0.64
RFFL-205ENST00000415395 SPTY2D1-AS1A0A0U1RR47 76 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 METTL12A8MUP2 240 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 FOXE1O00358 373 aaPredicted RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 NOBOXO60393 691 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CNOT3O75175 753 aaKnown RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 RASGRP1O95267 797 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 SERPINA1P01009 418 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CD27P26842 260 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 PKLRP30613 574 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 BLKP51451 505 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 MAPK10P53779 464 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CLDN8P56748 225 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 ILF3Q12906 894 aaKnown RBP eCLIP11.06□□□□□ -0.64
RFFL-205ENST00000415395 CDK5R2Q13319 367 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 KRT33BQ14525 404 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 OXA1LQ15070 435 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 TPRG1LQ5T0D9 272 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 IQCHQ86VS3 1027 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 P2RY8Q86VZ1 359 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 C17orf64Q86WR6 236 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CALHM3Q86XJ0 350 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 LAS2Q8IYD9 372 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 OR2L8Q8NGY9 312 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 PHF10Q8WUB8 498 aaKnown RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 ZFPM2Q8WW38 1151 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 STARD8Q92502 1023 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 TAMM41Q96BW9 452 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 SPACA7Q96KW9 195 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CPPED1Q9BRF8 314 aaPredicted RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 ORAI3Q9BRQ5 295 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 TPSD1Q9BZJ3 242 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 FBXO8Q9NRD0 319 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 IMP3Q9NV31 184 aaKnown RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 SPATA6Q9NWH7 488 aaPredicted RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 SIT1Q9Y3P8 196 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 PLEKHM1Q9Y4G2 1056 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CFAP20Q9Y6A4 193 aaKnown RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 THEGLP0DJG4 465 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 PCMT1P22061 227 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CXCR2P25025 360 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 SERPINB1P30740 379 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 OPRL1P41146 370 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 MAGEA2P43356 314 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CXCL12P48061 93 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 TMED10P49755 219 aaKnown RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 HMGCS1Q01581 520 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 MTAPQ13126 283 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 SPCS2Q15005 226 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 CTU2Q2VPK5 515 aaKnown RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 SGO1Q5FBB7 561 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 SPANXN4Q5MJ08 99 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 SLC16A12Q6ZSM3 486 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 NCCRP1Q6ZVX7 275 aaPredicted RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 PRSS48Q7RTY5 328 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 ZDHHC21Q8IVQ6 265 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 SLC22A18ASQ8N1D0 253 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 KRT78Q8N1N4 520 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 OR7G3Q8NG95 312 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 GPBAR1Q8TDU6 330 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 NELL1Q92832 810 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 TSACCQ96A04 125 aaPredicted RBP11.06□□□□□ -0.64
RFFL-205ENST00000415395 TESCQ96BS2 214 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 FCRL1Q96LA6 429 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 ALPK1Q96QP1 1244 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 HBEGFQ99075 208 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 PSD2Q9BQI7 771 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 SPATA9Q9BWV2 254 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 GSDMCQ9BYG8 508 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 TMEM168Q9H0V1 697 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 NT5DC2Q9H857 520 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 AKIP1Q9NQ31 210 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 PRDM8Q9NQV8 689 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 KIF17Q9P2E2 1029 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 VPS29Q9UBQ0 182 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 TBC1D29Q9UFV1 150 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 MAPRE3Q9UPY8 281 aa11.06□□□□□ -0.64
RFFL-205ENST00000415395 EML5Q05BV3 1969 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 TRBV5-3A0A0A0MS03 114 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 A6NCN8 305 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 OR5K4A6NMS3 321 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 PTGES3LE9PB15 166 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 STK25O00506 426 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 RGS10O43665 173 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 PRMT3O60678 531 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 F3P13726 295 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 FPR1P21462 350 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 HOXA6P31267 233 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 DNAJA1P31689 397 aaKnown RBP11.05□□□□□ -0.64
RFFL-205ENST00000415395 PIGAP37287 484 aa11.05□□□□□ -0.64
RFFL-205ENST00000415395 ACTR1BP42025 376 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms