RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 SOAT1P35610 550 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 OR2B6P58173 313 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 DCDC1P59894 354 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 STARD3Q14849 445 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 NDUFA5Q16718 116 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 LRRC26Q2I0M4 334 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 SPOUT1Q5T280 376 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 ZNF770Q6IQ21 691 aaPredicted RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 OR8H2Q8N162 312 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TRAM1L1Q8N609 369 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 REPS1Q96D71 796 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 IL4I1Q96RQ9 567 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 FAM83CQ9BQN1 747 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 OR51B5Q9H339 312 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 HHATLQ9HCP6 504 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TAS2R9Q9NYW1 312 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 H3BM21 787 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 SRPRAP08240 638 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 GJA1P17302 382 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 CD72P21854 359 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 SLC7A9P82251 487 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TSTA3Q13630 321 aaPredicted RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 SLBPQ14493 270 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 DUSP7Q16829 419 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 LEXMQ3ZCV2 418 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 HENMT1Q5T8I9 393 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TMC5Q6UXY8 1006 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 LMNTD1Q8N9Z9 388 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 FAM46DQ8NEK8 389 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 FLCNQ8NFG4 579 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 MYLIPQ8WY64 445 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 OR2A14Q96R47 310 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 ASPNQ9BXN1 380 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 RC3H2Q9HBD1 1191 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 EXOSC4Q9NPD3 245 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 C11orf16Q9NQ32 467 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 ANGPT4Q9Y264 503 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TRAPPC4Q9Y296 219 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 WBP11Q9Y2W2 641 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 HELZP42694 1942 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 CXorf51AA0A1B0GTR3 108 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 ARRDC5A6NEK1 342 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 SLITRK5O94991 958 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 IFNW1P05000 195 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 URODP06132 367 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 CYP2A6P11509 494 aaPredicted RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 PIPP12273 146 aaPredicted RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 PBLDP30039 288 aaPredicted RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TIE1P35590 1138 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 RPS19P39019 145 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TAS2R50P59544 299 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TBPL1P62380 186 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 FAM71E1Q6IPT2 247 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 UTS2BQ765I0 119 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 MMAAQ8IVH4 418 aaKnown RBP17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TAGAPQ8N103 731 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 OR2A12Q8NGT7 310 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 ZNF480Q8WV37 535 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 TIFAQ96CG3 184 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 BARHL1Q9BZE3 327 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 C3orf14Q9HBI5 128 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 SLC25A19Q9HC21 320 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 DMRT3Q9NQL9 472 aa17.2■□□□□ 0.34
SCARB1-203ENST00000415380 LEFTY2O00292 366 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 ZNF197O14709 1029 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 FFAR1O14842 300 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 ATG13O75143 517 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 SCG5P05408 212 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 KRT8P05787 483 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 CKMT1AP12532 417 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 SOX3P41225 446 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 PNLIPRP1P54315 467 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.19■□□□□ 0.342e-8■□□□□ 10.3
SCARB1-203ENST00000415380 NRARPQ7Z6K4 114 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 UBQLNLQ8IYU4 475 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 VANGL1Q8TAA9 524 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-203ENST00000415380 BTN2A2Q8WVV5 523 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 NPAP1Q9NZP6 1156 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 LSM2Q9Y333 95 aaKnown RBP17.19■□□□□ 0.34
SCARB1-203ENST00000415380 SCN5AQ14524 2016 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 TRBV4-1A0A0J9YWV2 114 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 A0A1W2PRB8 838 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 FOXE1O00358 373 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-203ENST00000415380 RGS13O14921 159 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 CYP7B1O75881 506 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 NPPBP16860 134 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 HTR3AP46098 478 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 ALDH9A1P49189 494 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 LIM2P55344 173 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.343e-10■□□□□ 8.1
SCARB1-203ENST00000415380 C6orf183Q5T699 404 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 SLX4IPQ5VYV7 408 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 NXNL2Q5VZ03 156 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 BRAT1Q6PJG6 821 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 LAS2Q8IYD9 372 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 ST13P5Q8NFI4 369 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-203ENST00000415380 OR6F1Q8NGZ6 308 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 TPK1Q9H3S4 243 aa17.19■□□□□ 0.34
SCARB1-203ENST00000415380 GPBP1L1Q9HC44 474 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-203ENST00000415380 MYNNQ9NPC7 610 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms