RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 FAM45AQ8TCE6 357 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MS4A6EQ96DS6 147 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PBKQ96KB5 322 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 RASL10BQ96S79 203 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 EGFL8Q99944 293 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 DNAJB12Q9NXW2 375 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MRPS33Q9Y291 106 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 LIPGQ9Y5X9 500 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CLCA3PQ9Y6N3 262 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PRRC2AP48634 2157 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 A0A0G2JNJ9 132 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FAM221AA4D161 298 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 LRIT2A6NDA9 550 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FIGNL2A6NMB9 653 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CDC7O00311 574 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 B3GALT2O43825 422 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GLSO94925 669 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 IGHG3P01860 377 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 C1GALT1C1LP0DN25 315 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GLI4P10075 376 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MAGEA5P43359 124 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 DLX5P56178 289 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ELAVL1Q15717 326 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 BBS9Q3SYG4 887 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 RTL6Q6ICC9 239 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 HSDL2Q6YN16 418 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 RTL4Q6ZR62 310 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GK5Q6ZS86 529 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZNF595Q8IYB9 648 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 KLHDC8AQ8IYD2 350 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TMEM251Q8N6I4 163 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MYRIPQ8NFW9 859 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GRK7Q8WTQ7 553 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SCYL1Q96KG9 808 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FOXC2Q99958 501 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FAM173AQ9BQD7 235 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NAT9Q9BTE0 207 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CCM2LQ9NUG4 571 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 Q9UFV3 132 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ACAD8Q9UKU7 415 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CORO1CQ9ULV4 474 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FAM215AQ9Y5M1 114 aa13.21□□□□□ -0.29
HLA-DQB2-229ENST00000411527 A0A088AWK7 358 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 A0A1B0GVC2 190 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NPEPPSL1A6NEC2 478 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CTAG2O75638 210 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 WDR47O94967 919 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 GNAZP19086 355 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TNNI3P19429 210 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ZNF10P21506 573 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 GDF5P43026 501 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 HK2P52789 917 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PLA2G16P53816 162 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 FOLH1Q04609 750 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SLBPQ14493 270 aaKnown RBP eCLIP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SLC10A1Q14973 349 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PPP1R7Q15435 360 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 C18orf21Q32NC0 220 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 HP1BP3Q5SSJ5 553 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ARSKQ6UWY0 536 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 FAM47EQ6ZV65 393 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TRILQ7L0X0 811 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TGIF2LYQ8IUE0 185 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 LIX1LQ8IVB5 337 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 MORN4Q8NDC4 146 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CHDHQ8NE62 594 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 TTLQ8NG68 377 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 PTPMT1Q8WUK0 201 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 DAZLQ92904 295 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 QRFPRQ96P65 431 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 NAP1L3Q99457 506 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 POLDIP3Q9BY77 421 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ALOXE3Q9BYJ1 711 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 OR8D2Q9GZM6 311 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CXXC4Q9H2H0 198 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 LDAHQ9H6V9 325 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 IL1RL2Q9HB29 575 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ALKBH4Q9NXW9 302 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 L3MBTL1Q9Y468 752 aa13.2□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ATP6AP2A0A1C7CYW4 349 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ANKDD1BA6NHY2 528 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CYR61O00622 381 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 AQP7O14520 342 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CTNSO60931 367 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CLEC3AO75596 197 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ATP6AP2O75787 350 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CELA3AP09093 270 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ZNF37AP17032 561 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 ADH7P40394 386 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 DNASE1L1P49184 302 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 MAN2A2P49641 1150 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 HNMTP50135 292 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 LIM2P55344 173 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 RNF4P78317 190 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 CDKL1Q00532 357 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 STX4Q12846 297 aa13.19□□□□□ -0.3
HLA-DQB2-229ENST00000411527 SNTB1Q13884 538 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms