RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 HKDC1Q2TB90 917 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ZNF829Q3KNS6 432 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 FRA10AC1Q70Z53 315 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 RNF44Q7L0R7 432 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 PLD3Q8IV08 490 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CCDC28AQ8IWP9 274 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 LRRC56Q8IYG6 542 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 LRRC34Q8IZ02 419 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 GRK7Q8WTQ7 553 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 KCNJ9Q92806 393 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 TRIM63Q969Q1 353 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 MIB2Q96AX9 1013 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 C10orf90Q96M02 699 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 SPSB2Q99619 263 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 TRIM51Q9BSJ1 452 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 AARSD1Q9BTE6 412 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 LRRC1Q9BTT6 524 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 DPH7Q9BTV6 452 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 DHRS4Q9BTZ2 278 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 RAB11FIP5Q9BXF6 653 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 SOX17Q9H6I2 414 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 LIN7BQ9HAP6 207 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 MRPL39Q9NYK5 338 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 TAC3Q9UHF0 121 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 PCYOX1Q9UHG3 505 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ATP6V1HQ9UI12 483 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 DMGDHQ9UI17 866 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 FBXO5Q9UKT4 447 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 SRPK3Q9UPE1 567 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 SH2B3Q9UQQ2 575 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 PADI2Q9Y2J8 665 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 AP3M1Q9Y2T2 418 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 KLK4Q9Y5K2 254 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 OR2A25A4D2G3 310 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 FITM1A5D6W6 292 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 TARM1B6A8C7 271 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 E7ENX8 843 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 DSCR3O14972 297 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 PGAM1P18669 254 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 STX2P32856 288 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 UQCRFS1P47985 274 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 ARHGDIBP52566 201 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 PNLIPRP1P54315 467 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 TAP2Q03519 686 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 KCTD21Q4G0X4 260 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 TIGD2Q4W5G0 525 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 C6orf10Q5SRN2 563 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 TRMT10BQ6PF06 316 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 AKAP14Q86UN6 197 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 CENPSQ8N2Z9 138 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 Q8NA96 180 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 C2CD4AQ8NCU7 369 aaPredicted RBP9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 ASB11Q8WXH4 323 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 ZUFSPQ96AP4 578 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 EBNA1BP2Q99848 306 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 SDHAF3Q9NRP4 125 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 INTS7Q9NVH2 962 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 P4HTMQ9NXG6 502 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 UNC79Q9P2D8 2635 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 MAPRE3Q9UPY8 281 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 DHRS7Q9Y394 339 aa9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 PCDHGA9Q9Y5G4 932 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-202ENST00000409020 DOPEY2Q9Y3R5 2298 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 LRBAP50851 2863 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 HYKKA2RU49 373 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 H0YGG7 62 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 GFYI3L273 518 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 SHOXO15266 292 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 ST8SIA5O15466 376 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 CLOCKO15516 846 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 P2RX6O15547 441 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 SORBS2O94875 1100 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 AHSGP02765 367 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 CATP04040 527 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 IMPA1P29218 277 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 RPA3P35244 121 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 CARSP49589 748 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 EFNA3P52797 238 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 ARF3P61204 181 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 VBP1P61758 197 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 ZNF844Q08AG5 666 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 C2orf54Q08AI8 447 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 SSPNQ14714 243 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 GRM7Q14831 915 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 FASTKD3Q14CZ7 662 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 ZXDCQ2QGD7 858 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 ZC3H12BQ5HYM0 836 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 DCAF10Q5QP82 559 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 UBE2R2Q712K3 238 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 MED25Q71SY5 747 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 OVCH1Q7RTY7 1134 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 SATL1Q86VE3 508 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 PAQR7Q86WK9 346 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 RAB43Q86YS6 212 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 PRSS58Q8IYP2 241 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 CCDC116Q8IYX3 515 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 ELMOD2Q8IZ81 293 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 RAB42Q8N4Z0 105 aa9.18□□□□□ -0.94
NIF3L1-202ENST00000409020 RBMXL3Q8N7X1 1067 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms