RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 FCRLBQ6BAA4 426 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 GRHL2Q6ISB3 625 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 SLC25A25Q6KCM7 469 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 RPTNQ6XPR3 784 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 MYLK4Q86YV6 388 aaPredicted RBP8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 LAS2Q8IYD9 372 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 SLC34A3Q8N130 599 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 ARMC10Q8N2F6 343 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 C17orf53Q8N3J3 647 aaPredicted RBP8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 MMGT1Q8N4V1 131 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 TMEM156Q8N614 296 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 THAP3Q8WTV1 239 aaPredicted RBP8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 ZNF592Q92610 1267 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 SCMH1Q96GD3 660 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 ART5Q96L15 291 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 QRFPRQ96P65 431 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 TAAR6Q96RI8 345 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 FMO2Q99518 471 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 PELOQ9BRX2 385 aaKnown RBP8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 MS4A8Q9BY19 250 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 KLHL31Q9H511 634 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 CDCP1Q9H5V8 836 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 ACTR8Q9H981 624 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 IGSF5Q9NSI5 407 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 ZDHHC18Q9NUE0 388 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 PHF11Q9UIL8 331 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 PPIEQ9UNP9 301 aaKnown RBP8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 TSC22D4Q9Y3Q8 395 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 CLCA3PQ9Y6N3 262 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 SVILO95425 2214 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 RELNP78509 3460 aa8.5□□□□□ -1.05
SNORD88A-201ENST00000408314 A0A096LPK6 155 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 TRGV8A0A0C4DH27 118 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 A0A0G2JN53 185 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 TRBV11-1A0A0K0K1C0 115 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 ASPDHA6ND91 283 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 OR2W5A6NFC9 320 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 KLRC4-KLRK1H3BQV0 150 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 NME2P1O60361 137 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 CTNSO60931 367 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 ZFAND5O76080 213 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 B3GALT4O96024 378 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 COL6A2P12110 1019 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 ZNF24P17028 368 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 NME2P22392 152 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 HIST1H1TP22492 207 aaPredicted RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 CERS1P27544 350 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 BUD31P41223 144 aaPredicted RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 SSR4P51571 173 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 LIM2P55344 173 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 MLF1P58340 268 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 SLC7A5Q01650 507 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 BMPR2Q13873 1038 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 RUNX2Q13950 521 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 ZRSR2Q15696 482 aaKnown RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 KHDRBS2Q5VWX1 349 aaKnown RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 BNC2Q6ZN30 1099 aaPredicted RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 TEX9Q8N6V9 391 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 FAM47BQ8NA70 645 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 MORN4Q8NDC4 146 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 OR7G3Q8NG95 312 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 KIF18AQ8NI77 898 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 ZNF473Q8WTR7 871 aaKnown RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 KCTD4Q8WVF5 259 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 RELTQ969Z4 430 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 ESAMQ96AP7 390 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 RGMAQ96B86 450 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 NXNL1Q96CM4 212 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 GPR137Q96N19 417 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 FUT8Q9BYC5 575 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 VPS11Q9H270 941 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 TRIM45Q9H8W5 580 aaPredicted RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 WDR41Q9HAD4 459 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 TIMMDC1Q9NPL8 285 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 NECTIN3Q9NQS3 549 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 KLHL1Q9NR64 748 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 PNO1Q9NRX1 252 aaKnown RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 NINJ2Q9NZG7 142 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 COPS7AQ9UBW8 275 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 FBXW2Q9UKT8 454 aa8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 YARS2Q9Y2Z4 477 aaKnown RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 SPENQ96T58 3664 aaKnown RBP8.49□□□□□ -1.05
SNORD88A-201ENST00000408314 UNC79Q9P2D8 2635 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 A0A087WUV0 522 aaPredicted RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 A1L4Q6 167 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 A8MUA0 341 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 C4orf51C9J302 202 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 FAM227AF5H4B4 570 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 H0YIV9 168 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 SMIM24O75264 130 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 FAM155BO75949 473 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 NEURL1O76050 574 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ACSL3O95573 720 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 TNNI3P19429 210 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 CD22P20273 847 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 CPN2P22792 545 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ATP5A1P25705 553 aaKnown RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 PTX3P26022 381 aaPredicted RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 TPP2P29144 1249 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms