RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 VEZF1Q14119 521 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 CPTPQ5TA50 214 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 CPZQ66K79 652 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 RAET1GQ6H3X3 334 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 STK32CQ86UX6 486 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 SYTL1Q8IYJ3 562 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 KRT78Q8N1N4 520 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 RAB42Q8N4Z0 105 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 ZNF248Q8NDW4 579 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 FBXO30Q8TB52 745 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 MTERF3Q96E29 417 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 WBP1Q96G27 269 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 BMFQ96LC9 184 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 PKP4Q99569 1192 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 TUBA1CQ9BQE3 449 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 PCBD2Q9H0N5 130 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 ING2Q9H160 280 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 SLC25A37Q9NYZ2 338 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 ZNF282Q9UDV7 671 aaPredicted RBP12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 PPT2Q9UMR5 302 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 CLCA2Q9UQC9 943 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 PIEZO2Q9H5I5 2752 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 TRIM64A6NGJ6 449 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 GPR89AB7ZAQ6 455 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 K7ESM1 405 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 KLK10O43240 276 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 NOL3O60936 208 aaKnown RBP12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 GPR89BP0CG08 455 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 PCNAP12004 261 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 GPX2P18283 190 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 KELP23276 732 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 IMPA1P29218 277 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 PIK3CBP42338 1070 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 GSTM5P46439 218 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 CDK9P50750 372 aaKnown RBP12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 PCBP4P57723 403 aaKnown RBP12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 VAC14Q08AM6 782 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 BNIP3Q12983 259 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 ZBED5Q49AG3 693 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 CYBRD1Q53TN4 286 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 ZC3H12BQ5HYM0 836 aaKnown RBP12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 DOK6Q6PKX4 331 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 Q6ZSR6 202 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF621Q6ZSS3 439 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 USP51Q70EK9 711 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 THAP5Q7Z6K1 395 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 ABI3BPQ7Z7G0 1075 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 IQCHQ86VS3 1027 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 TRAPPC5Q8IUR0 188 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 MSRB3Q8IXL7 192 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 CFAP206Q8IYR0 622 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 C8orf59Q8N0T1 100 aaPredicted RBP12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 SETD9Q8NE22 299 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 OR2L2Q8NH16 312 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 CLHC1Q8NHS4 586 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 FAM174AQ8TBP5 190 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 SAP25Q8TEE9 199 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 CHTF18Q8WVB6 975 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 RAD51AP1Q96B01 352 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 KLHDC7BQ96G42 594 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 HIC2Q96JB3 615 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 MAGED4Q96JG8 741 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 TBCDQ9BTW9 1192 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 DUSP26Q9BV47 211 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 TRIM8Q9BZR9 551 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 BHLHE41Q9C0J9 482 aaPredicted RBP12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 PITHD1Q9GZP4 211 aaPredicted RBP12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 TIMMDC1Q9NPL8 285 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 SERHLQ9NQF3 203 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 VPS4AQ9UN37 437 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 OR1A2Q9Y585 309 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 PCDHB11Q9Y5F2 797 aa12.33□□□□□ -0.44
SMARCB1-203ENST00000407082 A0A1W2PR77 199 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 E7EQ34 232 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 TLR4O00206 839 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 DLGAP1O14490 977 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 TOR1BO14657 336 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 SCAMP2O15127 329 aaKnown RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 DPM1O60762 260 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 UGT2B11O75310 529 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 E2F6O75461 281 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 DNAJB5O75953 348 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 PRKD3O94806 890 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 SERPINA1P01009 418 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 WNT1P04628 370 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ALPLP05186 524 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ABCB1P08183 1280 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ANXA4P09525 319 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 THEGLP0DJG4 465 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 TEAD1P28347 426 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 TIA1P31483 386 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 TRIM23P36406 574 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 RABIFP47224 123 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ARRB1P49407 418 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 GZMMP51124 257 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms