RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 OVOS2A0A0G2JMS6 1433 aa4.28□□□□□ -1.72
HMGB3P18-201ENST00000406327 IBTKQ9P2D0 1353 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLIT3O75094 1523 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNF142P52746 1687 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 H0YIG0 161 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC28A1O00337 649 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 FGF17O60258 216 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 ACSL4O60488 711 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SURF6O75683 361 aaKnown RBP4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 MT-ATP6P00846 226 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 TSHBP01222 138 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SFTPBP07988 381 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SERPINF2P08697 491 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 ANPEPP15144 967 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 GOT1P17174 413 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 UGT1A6P19224 532 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 NR1D1P20393 614 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 MX1P20591 662 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 CEACAM8P31997 349 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 NSFP46459 744 aaKnown RBP4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 CLCN4P51793 760 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 KCNK10P57789 538 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SSTP61278 116 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 FKBP1BP68106 108 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 CDR2Q01850 454 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZC2HC1CQ53FD0 456 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 HSP90AA5PQ58FG0 334 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 TEX35Q5T0J7 233 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNF790Q6PG37 636 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 PRSS57Q6UWY2 283 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 C9orf139Q6ZV77 190 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC16A9Q7RTY1 509 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 COX8CQ7Z4L0 72 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 PPP1R42Q7Z4L9 355 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 KIRREL3Q8IZU9 778 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 GPC2Q8N158 579 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 RFLNBQ8N5W9 214 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 LRTM2Q8N967 370 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SMYD1Q8NB12 490 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SUSD6Q92537 303 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 SEPT8Q92599 483 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 HAS2Q92819 552 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 DTD2Q96FN9 168 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 UBAC1Q9BSL1 405 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 ACPTQ9BZG2 426 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 TRPV6Q9H1D0 765 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 MARCH7Q9H992 704 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 GPN1Q9HCN4 374 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 PANK4Q9NVE7 773 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 TBC1D13Q9NVG8 400 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 HYPKQ9NX55 129 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 RNF186Q9NXI6 227 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 NINJ2Q9NZG7 142 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 DCCP43146 1447 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 ADCY9O60503 1353 aa4.27□□□□□ -1.73
HMGB3P18-201ENST00000406327 CHD2O14647 1828 aaKnown RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 PXDNLA1KZ92 1463 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 FAM172BPA6NC97 362 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 ANTXRLA6NF34 631 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 CFAP73A6NFT4 308 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 A8MVM7 634 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 CHUKO15111 745 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 TEX28O15482 410 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 BUB3O43684 328 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 EXTL3O43909 919 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 TRIM16O95361 564 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 CRYAAP02489 173 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCNA2P20248 432 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 CHMLP26374 656 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 MARCKSP29966 332 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 SRD5A2P31213 254 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC1A3P43003 542 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 MAGEA11P43364 429 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 NUMBP49757 651 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 GPC3P51654 580 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 HNRNPFP52597 415 aaKnown RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 NANOS2P60321 138 aaKnown RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 SRP54P61011 504 aaKnown RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 TRA2AQ13595 282 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 ITGA9Q13797 1035 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 GRB14Q14449 540 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 RBM39Q14498 530 aaKnown RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 C12orf60Q5U649 245 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNF324BQ6AW86 544 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 PSRC1Q6PGN9 363 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 DLEU7Q6UYE1 221 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 TAF8Q7Z7C8 310 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 PIGZQ86VD9 579 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 FBXW8Q8N3Y1 598 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCDC185Q8N715 623 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCNYQ8ND76 341 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCDC110Q8TBZ0 833 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 DYRK2Q92630 601 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 FAM46BQ96A09 425 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 C14orf79Q96F83 325 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 MARK4Q96L34 752 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 C16orf45Q96MC5 204 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 ATG10Q9H0Y0 220 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 C5orf66Q9H5L9 145 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms