RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 KCNK2O95069 426 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ADAP00813 363 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 GASTP01350 101 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 APOA1P02647 267 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 GBAP04062 536 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 RB1P06400 928 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ELFN1P0C7U0 828 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ALOX12P18054 663 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 DSTNP60981 165 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 CYP4F2P78329 520 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 RHAGQ02094 409 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 MED22Q15528 200 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 BCL7AQ4VC05 210 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 REEP3Q6NUK4 255 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ERAP2Q6P179 960 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 KLHL17Q6TDP4 642 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 NXPE4Q6UWF7 544 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 LIPIQ6XZB0 460 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 GDPGP1Q6ZNW5 385 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 KIAA0907Q7Z7F0 614 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 CCDC190Q86UF4 302 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 NATD1Q8N6N6 113 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 FAM83FQ8NEG4 500 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 FLCNQ8NFG4 579 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 OR9A1PQ8NGU1 263 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 WDR48Q8TAF3 677 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 SETD7Q8WTS6 366 aaKnown RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 PDXPQ96GD0 296 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 PPP1R16AQ96I34 528 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 Q96MT0 163 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 YME1L1Q96TA2 773 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 NLNQ9BYT8 704 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 NUAK2Q9H093 628 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 OR51B5Q9H339 312 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 RNF167Q9H6Y7 350 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 NMNAT1Q9HAN9 279 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-204ENST00000404424 SPHK2Q9NRA0 654 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 ACSL6Q9UKU0 697 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 RAB23Q9ULC3 237 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 CCL26Q9Y258 94 aa10.26□□□□□ -0.77
CLIP4-204ENST00000404424 NRG2O14511 850 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 KLK1P06870 262 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 C8AP07357 584 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TYRP14679 529 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 POU2F1P14859 743 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 FUT4P22083 530 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 GTF2E2P29084 291 aaKnown RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TIE1P35590 1138 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 SOAT1P35610 550 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 PPM1AP35813 382 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 MMP12P39900 470 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 ATN1P54259 1190 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 SNRPGP62308 76 aaKnown RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 GANABQ14697 944 aaKnown RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 STARD3Q14849 445 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TSTQ16762 297 aaKnown RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 MEDAGQ5VYS4 303 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 ZNF770Q6IQ21 691 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TMEM53Q6P2H8 277 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 ATCAYQ86WG3 371 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 HEATR4Q86WZ0 1026 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CYP4Z2PQ8N1L4 340 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 OR5AK3PQ8NH89 298 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 OR5M11Q96RB7 305 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CORO1BQ9BR76 489 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TAPBPLQ9BX59 468 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CFHR5Q9BXR6 569 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 ZCCHC2Q9C0B9 1178 aaKnown RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 C3orf14Q9HBI5 128 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 MOV10Q9HCE1 1003 aaKnown RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TRIM39Q9HCM9 518 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 FZD3Q9NPG1 666 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 QPCTLQ9NXS2 382 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 NDOR1Q9UHB4 597 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 DSPPQ9NZW4 1301 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CACNB4O00305 520 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 ARHGAP33O14559 1287 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 DYRK3O43781 588 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 KLHL18O94889 574 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 OXSR1O95747 527 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CTSLP07711 333 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CD72P21854 359 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 DDX6P26196 483 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 PBLDP30039 288 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CNR2P34972 360 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 PCYT1AP49585 367 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TAP2Q03519 686 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 ILKQ13418 452 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CCDC92Q53HC0 331 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 SOWAHCQ53LP3 525 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 DEPDC1Q5TB30 811 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TMEM215Q68D42 235 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 DESI1Q6ICB0 168 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 LILRA6Q6PI73 481 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 TRIM69Q86WT6 500 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 KRT73Q86Y46 540 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 LRRC56Q8IYG6 542 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 REM2Q8IYK8 340 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-204ENST00000404424 CFAP206Q8IYR0 622 aa10.25□□□□□ -0.77
CLIP4-204ENST00000404424 GALNT6Q8NCL4 622 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms