RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 PRR23AA6NEV1 266 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 CLCA1A8K7I4 914 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 NPC1O15118 1278 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 SOX3P41225 446 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 ERVFC1P60507 584 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 TPRG1LQ5T0D9 272 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 LIPIQ6XZB0 460 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 ADCK2Q7Z695 626 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 CHCHD4Q8N4Q1 142 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 LMLNQ96KR4 655 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 DMRTB1Q96MA1 342 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 F2RL3Q96RI0 385 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 SPHK2Q9NRA0 654 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 LRRTM2O43300 516 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 SP140Q13342 867 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 VEZF1Q14119 521 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 METTL2BQ6P1Q9 378 aaKnown RBP16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 GALNT13Q8IUC8 556 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■□□□□ 8.6
SNRNP70-202ENST00000401730 IQCF1Q8N6M8 205 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 OR5AR1Q8NGP9 310 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 RHOXF1Q8NHV9 184 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 CPEB1Q9BZB8 566 aaKnown RBP16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 CCNB1IP1Q9NPC3 277 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 CLEC2DQ9UHP7 191 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 TRBV4-1A0A0J9YWV2 114 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 H0YIV9 168 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 TAF4O00268 1085 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 DSCR3O14972 297 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 LZTS3O60299 673 aaPredicted RBP16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 C1orf105O95561 183 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 IL1RNP18510 177 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 PRPH2P23942 346 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 GPR1P46091 355 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 ASMTP46597 345 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 MRPS15P82914 257 aaKnown RBP16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 DEFB115Q30KQ5 88 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 MPP7Q5T2T1 576 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 ANXA8L1Q5VT79 327 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 CEACAM20Q6UY09 585 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 UBE2J2Q8N2K1 259 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 TMEM203Q969S6 136 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 VMP1Q96GC9 406 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 HHIPQ96QV1 700 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 CNPPD1Q9BV87 410 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 PRR14Q9BWN1 585 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 IL36AQ9UHA7 158 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 BOLA1Q9Y3E2 137 aa16.28■□□□□ 0.2
SNRNP70-202ENST00000401730 ADAMDEC1O15204 470 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 GUCY1B2O75343 617 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 PRKRAO75569 313 aaKnown RBP16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 TNNI3P19429 210 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 DAB2P98082 770 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 SPDYE7PQ495Y7 208 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 BRAT1Q6PJG6 821 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 CYP4Z2PQ8N1L4 340 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 ATL1Q8WXF7 558 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 CTRCQ99895 268 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 CHST8Q9H2A9 424 aa16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF282Q9UDV7 671 aaPredicted RBP16.27■□□□□ 0.2
SNRNP70-202ENST00000401730 CTSAP10619 480 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 CXCR4P61073 352 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 MICAQ29983 383 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 PAQR6Q6TCH4 344 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 C12orf40Q86WS4 652 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 MYDGFQ969H8 173 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 EPYCQ99645 322 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 KLHL3Q9UH77 587 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 PCDHGA2Q9Y5H1 932 aa16.27■□□□□ 0.19
SNRNP70-202ENST00000401730 POP7O75817 140 aaKnown RBP16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 ARHGEF15O94989 841 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 KRT8P05787 483 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 CDK1P06493 297 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 PCGF2P35227 344 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 C10orf62Q5T681 223 aaPredicted RBP16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 ZSCAN5AQ9BUG6 496 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 CXorf36Q9H7Y0 433 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 ACER3Q9NUN7 267 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 OSGIN1Q9UJX0 560 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 PLXNB3Q9ULL4 1909 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 REV3LO60673 3130 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 SLC5A10A0PJK1 596 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 C5orf58C9J3I9 102 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 KIAA0513O60268 411 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 OR10H3O60404 316 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 CCNKO75909 580 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 FURINP09958 794 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 S100A5P33763 92 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 TAP2Q03519 686 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 SPIN4Q56A73 249 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 CDKL4Q5MAI5 379 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 DESI1Q6ICB0 168 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 GRASPQ7Z6J2 395 aaPredicted RBP16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 LYSMD2Q8IV50 215 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 SLC34A3Q8N130 599 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 TRAM1L1Q8N609 369 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 C11orf24Q96F05 449 aaPredicted RBP16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 CDADC1Q9BWV3 514 aa16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 NMNAT1Q9HAN9 279 aaPredicted RBP16.26■□□□□ 0.19
SNRNP70-202ENST00000401730 NEK6Q9HC98 313 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms