RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MIXL1Q9H2W2 232 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 DIABLOQ9NR28 239 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 SPIN1Q9Y657 262 aaPredicted RBP16.36■□□□□ 0.21
PTPRA-205ENST00000399903 SLC38A8A6NNN8 435 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 INMT-MINDY4F8WBC2 141 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 ADAMDEC1O15204 470 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 ALPPP05187 535 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 HOXD10P28358 340 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 ZNF140P52738 457 aaPredicted RBP16.36■□□□□ 0.21
PTPRA-205ENST00000399903 CLDN8P56748 225 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 ACVR1Q04771 509 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 PLD1Q13393 1074 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 BTN1A1Q13410 526 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 PCBP2Q15366 365 aaKnown RBP eCLIP16.36■□□□□ 0.212e-6■■■□□ 19.1
PTPRA-205ENST00000399903 XKRXQ6PP77 449 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 OR6K2Q8NGY2 324 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 REPS1Q96D71 796 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 GPR63Q9BZJ6 419 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 PLCXD1Q9NUJ7 323 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 PCDHGA2Q9Y5H1 932 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 KCNE2Q9Y6J6 123 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 C2orf78A6NCI8 922 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 HNRNPCL2B2RXH8 293 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 NCR1O76036 304 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 SLC22A5O76082 557 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 ARSBP15848 533 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 CPN2P22792 545 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 ITPKAP23677 461 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 CRTC2Q53ET0 693 aaPredicted RBP16.35■□□□□ 0.21
PTPRA-205ENST00000399903 CHMP1BQ7LBR1 199 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 PDZD3Q86UT5 571 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 TCTE3Q8IZS6 198 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 CELF5Q8N6W0 485 aaKnown RBP16.35■□□□□ 0.21
PTPRA-205ENST00000399903 UPRTQ96BW1 309 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 NUP50Q9UKX7 468 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 SYN3O14994 580 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 SHOXO15266 292 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 CSO75390 466 aaKnown RBP16.35■□□□□ 0.21
PTPRA-205ENST00000399903 TOXO94900 526 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 RGS4P49798 205 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 GPR17Q13304 367 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 TAF12Q16514 161 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 AFMIDQ63HM1 303 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 LKAAEAR1Q8TD35 194 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 ZBED6CLQ96FA7 236 aaPredicted RBP16.35■□□□□ 0.21
PTPRA-205ENST00000399903 TM9SF2Q99805 663 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 GABARAPL3Q9BY60 117 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 RACGAP1Q9H0H5 632 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 TMEM248Q9NWD8 314 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 ARL15Q9NXU5 204 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 POFUT2Q9Y2G5 429 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 TEX46H3BTG2 121 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 KLKB1P03952 638 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 FCER2P06734 321 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 HLA-EP13747 358 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 CSTF2P33240 577 aaKnown RBP eCLIP16.35■□□□□ 0.21
PTPRA-205ENST00000399903 ETV3P41162 512 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 KCNJ10P78508 379 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 RPL6Q02878 288 aaKnown RBP16.35■□□□□ 0.21
PTPRA-205ENST00000399903 DUOXA1Q1HG43 343 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 TOR1AIP1Q5JTV8 583 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 B3GLCTQ6Y288 498 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 GET4Q7L5D6 327 aaPredicted RBP16.35■□□□□ 0.21
PTPRA-205ENST00000399903 DENND6BQ8NEG7 585 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 MTERF1Q99551 399 aaKnown RBP16.35■□□□□ 0.21
PTPRA-205ENST00000399903 BEX1Q9HBH7 125 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 NDUFAF4Q9P032 175 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 RIMKLBQ9ULI2 386 aa16.35■□□□□ 0.21
PTPRA-205ENST00000399903 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 F5H5T6 163 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 CASKO14936 926 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 LYRM1O43325 122 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 PCDH7O60245 1069 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 HPGDSO60760 199 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 CLDN9O95484 217 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 RPLP2P05387 115 aaKnown RBP16.34■□□□□ 0.21
PTPRA-205ENST00000399903 RRAS2P62070 204 aaPredicted RBP16.34■□□□□ 0.21
PTPRA-205ENST00000399903 LRIF1Q5T3J3 769 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 BCL2L15Q5TBC7 163 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 CNIH2Q6PI25 160 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 NAGSQ8N159 534 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 C9orf43Q8TAL5 461 aaPredicted RBP16.34■□□□□ 0.21
PTPRA-205ENST00000399903 KCNJ9Q92806 393 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 CD244Q9BZW8 370 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 ANKRA2Q9H9E1 313 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 KLHL21Q9UJP4 597 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 SCN5AQ14524 2016 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 ORC5O43913 435 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 STK16O75716 305 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 SYPP08247 313 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 LAMP1P11279 417 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 PTPN6P29350 595 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 AVPR1BP47901 424 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 RAB8AP61006 207 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 C1DQ13901 141 aaKnown RBP16.34■□□□□ 0.21
PTPRA-205ENST00000399903 FCN2Q15485 313 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 ANKS3Q6ZW76 656 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 C7orf34Q96L11 122 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 C1orf74Q96LT6 269 aa16.34■□□□□ 0.21
PTPRA-205ENST00000399903 TMEM45AQ9NWC5 275 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms