RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 CHRNGP07510 517 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 CERS1P27544 350 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 CCR10P46092 362 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 RRADP55042 308 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 FOXA1P55317 472 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 HSD17B7P56937 341 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 TRA2BP62995 288 aaKnown RBP16.65■□□□□ 0.26
CTNS-203ENST00000399306 STX3Q13277 289 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 ABRAXAS2Q15018 415 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 SGO1Q5FBB7 561 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 ATG16L1Q676U5 607 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 GALNT18Q6P9A2 607 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 MRGPREQ86SM8 312 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 LAPTM4BQ86VI4 370 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 CHTF18Q8WVB6 975 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 C11orf24Q96F05 449 aaPredicted RBP16.65■□□□□ 0.26
CTNS-203ENST00000399306 WBP1Q96G27 269 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 KCNA7Q96RP8 456 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 ACPTQ9BZG2 426 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 RAP2CQ9Y3L5 183 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 HS3ST3B1Q9Y662 390 aa16.65■□□□□ 0.26
CTNS-203ENST00000399306 A0A0G2JN53 185 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 SLC28A1O00337 649 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 RTCAO00442 366 aaKnown RBP16.64■□□□□ 0.25
CTNS-203ENST00000399306 CYR61O00622 381 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 SOCS6O14544 535 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 ALOX12BO75342 701 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 GUCY1B2O75343 617 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 RSL1D1O76021 490 aaKnown RBP16.64■□□□□ 0.25
CTNS-203ENST00000399306 FURINP09958 794 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 PRKAR1AP10644 381 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 HTR6P50406 440 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 RHAGQ02094 409 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 SLAMF1Q13291 335 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 UGT3A2Q3SY77 523 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 TCHHL1Q5QJ38 904 aaPredicted RBP16.64■□□□□ 0.25
CTNS-203ENST00000399306 COMMD6Q7Z4G1 85 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 APOBEC4Q8WW27 367 aaKnown RBP16.64■□□□□ 0.25
CTNS-203ENST00000399306 METTL21AQ8WXB1 218 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 ILKAPQ9H0C8 392 aaPredicted RBP16.64■□□□□ 0.25
CTNS-203ENST00000399306 TNFRSF12AQ9NP84 129 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 THAP1Q9NVV9 213 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 MCM8Q9UJA3 840 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 MAN2B2Q9Y2E5 1009 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 ASB4Q9Y574 426 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 DNAJC15Q9Y5T4 150 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 ITPR1Q14643 2758 aa16.64■□□□□ 0.25
CTNS-203ENST00000399306 IGKV3D-11A0A0A0MRZ8 115 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 WDR91A4D1P6 747 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 SAP18O00422 153 aaKnown RBP16.63■□□□□ 0.25
CTNS-203ENST00000399306 RGS14O43566 566 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 PRMT3O60678 531 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 DNAJB6O75190 326 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 HSPA4LO95757 839 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 C8orf89P0DMQ9 161 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 PPP2R1BP30154 601 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 TLX1P31314 330 aaPredicted RBP16.63■□□□□ 0.25
CTNS-203ENST00000399306 ARRB2P32121 409 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 OTX2P32243 289 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 BUD31P41223 144 aaPredicted RBP16.63■□□□□ 0.25
CTNS-203ENST00000399306 SLC1A6P48664 564 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 SOX8P57073 446 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 PPP2R2AP63151 447 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 OLR1P78380 273 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 MINDY4Q4G0A6 757 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 SH2D4BQ5SQS7 431 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 BORAQ6PGQ7 559 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 CYP20A1Q6UW02 462 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 KIRREL2Q6UWL6 708 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 GPR180Q86V85 440 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 SCUBE1Q8IWY4 988 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 ZBTB9Q96C00 473 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 PAIP2Q9BPZ3 127 aaKnown RBP16.63■□□□□ 0.25
CTNS-203ENST00000399306 MRPL1Q9BYD6 325 aaKnown RBP16.63■□□□□ 0.25
CTNS-203ENST00000399306 MED4Q9NPJ6 270 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 P4HTMQ9NXG6 502 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 WBP11Q9Y2W2 641 aaKnown RBP16.63■□□□□ 0.25
CTNS-203ENST00000399306 CCL27Q9Y4X3 112 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 KCNMB2Q9Y691 235 aa16.63■□□□□ 0.25
CTNS-203ENST00000399306 MED13Q9UHV7 2174 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 SCN2AQ99250 2005 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 ARHGAP10A1A4S6 786 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 PROM1O43490 865 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 KLHL41O60662 606 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 CTNSO60931 367 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 SNNO75324 88 aaPredicted RBP16.62■□□□□ 0.25
CTNS-203ENST00000399306 SH3BGRLO75368 114 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 EEDO75530 441 aaKnown RBP16.62■□□□□ 0.25
CTNS-203ENST00000399306 JRKO75564 520 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 FAM58BPP0C7Q3 252 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 ACPPP15309 386 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 BGNP21810 368 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 TPP2P29144 1249 aaPredicted RBP16.62■□□□□ 0.25
CTNS-203ENST00000399306 AP2B1P63010 937 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 TNFRSF17Q02223 184 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 ACSM2AQ08AH3 577 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 BST1Q10588 318 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 COL9A2Q14055 689 aaPredicted RBP16.62■□□□□ 0.25
CTNS-203ENST00000399306 IMPG1Q17R60 797 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 CES4AQ5XG92 561 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms