RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 C22orf42Q6IC83 251 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 XKRXQ6PP77 449 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 WDR20Q8TBZ3 569 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 ASB11Q8WXH4 323 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 KLHL6Q8WZ60 621 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 TMEM80Q96HE8 168 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 SLC35A5Q9BS91 424 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 GON7Q9BXV9 100 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 SLC25A19Q9HC21 320 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 THSD1Q9NS62 852 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 SNX11Q9Y5W9 270 aa13.38□□□□□ -0.27
APOB-202ENST00000399256 MPZL2O60487 215 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 GBAP04062 536 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 IFNA8P32881 189 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 CSKP41240 450 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 C19orf57Q0VDD7 668 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 DOC2AQ14183 400 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 CDKN3Q16667 212 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 BTBD16Q32M84 506 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 ATP13A5Q4VNC0 1218 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 ADGRF1Q5T601 910 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 TPGS1Q6ZTW0 290 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 HOMEZQ8IX15 550 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 LAS2Q8IYD9 372 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 SLC38A6Q8IZM9 456 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 DEDD2Q8WXF8 326 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 SLC25A46Q96AG3 418 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 NDUFB11Q9NX14 153 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 ZNF282Q9UDV7 671 aaPredicted RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 MALT1Q9UDY8 824 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 RAB23Q9ULC3 237 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 ALPK3Q96L96 1907 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 FADS2P1A8MWK0 482 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 SEPT4O43236 478 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 LRRTM2O43300 516 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 TPST2O60704 377 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 TNFRSF21O75509 655 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 C6orf47O95873 294 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 C8GP07360 202 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 OR3A3P47888 321 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 LIMS1P48059 325 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 ALDH9A1P49189 494 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 HNMTP50135 292 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 TATDN3Q17R31 274 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 GPR33Q49SQ1 333 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 CDKL4Q5MAI5 379 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 ANXA8L1Q5VT79 327 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 ZNF557Q8N988 423 aaPredicted RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 FAM181AQ8N9Y4 354 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 WFDC5Q8TCV5 224 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 CREB3L4Q8TEY5 395 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 GEMIN6Q8WXD5 167 aaKnown RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 PKP4Q99569 1192 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 TXNL4BQ9NX01 149 aaKnown RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 ZDHHC3Q9NYG2 299 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 NDRG2Q9UN36 371 aaKnown RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 TRAV19A0A0A6YYK7 116 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 NPIPB15A6NHN6 443 aaPredicted RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 MEN1O00255 615 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 PIPP12273 146 aaPredicted RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 ENDOUP21128 410 aaKnown RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 ERP29P30040 261 aaKnown RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 CCL23P55773 120 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.37□□□□□ -0.274e-31■□□□□ 9.3
APOB-202ENST00000399256 WDR45BQ5MNZ6 344 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 SERPINA13PQ6UXR4 307 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 TMIGD1Q6UXZ0 262 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 GDPGP1Q6ZNW5 385 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 PHC2Q8IXK0 858 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 BTN2A2Q8WVV5 523 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 CIDECQ96AQ7 238 aaPredicted RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 MED8Q96G25 268 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 MND1Q9BWT6 205 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 FAM83DQ9H4H8 585 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 SGK2Q9HBY8 427 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 SPATA6Q9NWH7 488 aaPredicted RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 PLEKHB1Q9UF11 243 aaPredicted RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 MAPRE3Q9UPY8 281 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 YARS2Q9Y2Z4 477 aaKnown RBP13.37□□□□□ -0.27
APOB-202ENST00000399256 ALG5Q9Y673 324 aa13.37□□□□□ -0.27
APOB-202ENST00000399256 OR6C75A6NL08 312 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 SYN3O14994 580 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 ARHGEF9O43307 516 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 MTX2O75431 263 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 MSL3P1P0C860 447 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 PSKH1P11801 424 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 CCND3P30281 292 aaPredicted RBP13.36□□□□□ -0.27
APOB-202ENST00000399256 AP1S1P61966 158 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 GPR19Q15760 415 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 ATP6V1C2Q8NEY4 427 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 UCK2Q9BZX2 261 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 STMN3Q9NZ72 180 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 CLCA3PQ9Y6N3 262 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 TRBV4-1A0A0J9YWV2 114 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 A0A1W2PQ72 361 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 SERTM1A2A2V5 107 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms