RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 B4GALT6Q9UBX8 382 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 PCTPQ9UKL6 214 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 ENTPD4Q9Y227 616 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 A0A0G2JN53 185 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 C1QTNF3-AMACRE9PGA6 284 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 LYRM1O43325 122 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 HNF1BP35680 557 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 PPP3R1P63098 170 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 FRG2Q64ET8 278 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 TPRG1Q6ZUI0 275 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 FUBP1Q96AE4 644 aaKnown RBP14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 MAGEB10Q96LZ2 347 aaPredicted RBP14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 FRG2BQ96QU4 278 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 PSD2Q9BQI7 771 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 SLC35A5Q9BS91 424 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 OR2AG1Q9H205 316 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 AKIP1Q9NQ31 210 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 VPS29Q9UBQ0 182 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 TGFB1P01137 390 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 EPHX1P07099 455 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 TNFRSF1BP20333 461 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 SOX3P41225 446 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 PGFP49763 221 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 OOSP2Q86WS3 158 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 PHYKPLQ8IUZ5 450 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 ZFP41Q8N8Y5 198 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 QRFPRQ96P65 431 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 MCMBPQ9BTE3 642 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 WNT6Q9Y6F9 365 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 METTL15A6NJ78 407 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 AKAP8O43823 692 aaKnown RBP14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 SLC10A3P09131 477 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 GALEQ14376 348 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 ZDHHC20Q5W0Z9 365 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 MED27Q6P2C8 311 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 GDPD4Q6W3E5 623 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 NXPE1Q8N323 547 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 ATP6V1C2Q8NEY4 427 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 OR10H4Q8NGA5 316 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 SLC35B4Q969S0 331 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 EXOSC8Q96B26 276 aaKnown RBP14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 TMEM175Q9BSA9 504 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 FOLH1BQ9HBA9 442 aa14.03□□□□□ -0.16
RPRD1A-202ENST00000399022 ARFGEF1Q9Y6D6 1849 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 TRBV23OR9-2A0A075B6M9 112 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 EEF1E1O43324 174 aaKnown RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 CH25HO95992 272 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 SSR2P43308 183 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 ARCN1P48444 511 aaKnown RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 PCDH1Q08174 1060 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 GPR19Q15760 415 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 GPRC6AQ5T6X5 926 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 OTUD1Q5VV17 481 aaPredicted RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 ANKRD34AQ69YU3 496 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 ADNP2Q6IQ32 1131 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 LETMD1Q6P1Q0 360 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 ARL9Q6T311 187 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 LINC00299Q6ZSB3 139 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 NEIL3Q8TAT5 605 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 RFT1Q96AA3 541 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 FERD3LQ96RJ6 166 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 AMBRA1Q9C0C7 1298 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 POPDC3Q9HBV1 291 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 ABCD2Q9UBJ2 740 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 SLCO3A1Q9UIG8 710 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 STON1Q9Y6Q2 735 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 URB1O60287 2271 aaKnown RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 UBFD1O14562 309 aaKnown RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 GSRP00390 522 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 LIPAP38571 399 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 PREPP48147 710 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 CAP1Q01518 475 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 CTU2Q2VPK5 515 aaKnown RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 SYT6Q5T7P8 510 aaPredicted RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 APCDD1Q8J025 514 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 C1orf52Q8N6N3 182 aaKnown RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 FAM86B1Q8N7N1 296 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 BEND7Q8N7W2 519 aaPredicted RBP14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 SAMD12Q8N8I0 201 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 KCNN1Q92952 543 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 RIT1Q92963 219 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 UBE2FQ969M7 185 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 GORASP2Q9H8Y8 452 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 FBXO8Q9NRD0 319 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 STUB1Q9UNE7 303 aa14.02□□□□□ -0.16
RPRD1A-202ENST00000399022 FNTBP49356 437 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 SEMA3BQ13214 749 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 BTN1A1Q13410 526 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 SMARCD3Q6STE5 483 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 TAS1R1Q7RTX1 841 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 SLC9A6Q92581 669 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 COQ8BQ96D53 544 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 HTATIP2Q9BUP3 242 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 PLSCR3Q9NRY6 295 aa14.02□□□□□ -0.17
RPRD1A-202ENST00000399022 TTC34A8MYJ7 566 aa14.01□□□□□ -0.17
RPRD1A-202ENST00000399022 RFPL3O75679 317 aa14.01□□□□□ -0.17
RPRD1A-202ENST00000399022 H1F0P07305 194 aaKnown RBP14.01□□□□□ -0.17
RPRD1A-202ENST00000399022 CXCR2P25025 360 aa14.01□□□□□ -0.17
RPRD1A-202ENST00000399022 NTSP30990 170 aa14.01□□□□□ -0.17
RPRD1A-202ENST00000399022 PSMD8P48556 350 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms