RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 LMAN2Q12907 356 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ZMYND11Q15326 602 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PCBP2Q15366 365 aaKnown RBP eCLIP4.82□□□□□ -1.644e-10■■■■■ 37.5
SSR1-202ENST00000397511 TAB1Q15750 504 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 AANATQ16613 207 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CCSMST1Q4G0I0 132 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 KLHL12Q53G59 568 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CARD16Q5EG05 197 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ZC3H12BQ5HYM0 836 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 FAM26DQ5JW98 314 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 IER5LQ5T953 404 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 C16orf54Q6UWD8 224 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ZNF551Q7Z340 670 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 NECAB2Q7Z6G3 386 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CACUL1Q86Y37 369 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SAMD14Q8IZD0 417 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 TAGAPQ8N103 731 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 STK40Q8N2I9 435 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ZNF557Q8N988 423 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 CHST14Q8NCH0 376 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 C7orf57Q8NEG2 295 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 FANK1Q8TC84 345 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 TMEM169Q96HH4 297 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HIST1H2AHQ96KK5 128 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HYLS1Q96M11 299 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HIST1H2AJQ99878 128 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 H2AFJQ9BTM1 129 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 KLF16Q9BXK1 252 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 TMEM121BQ9BXQ6 578 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 SLC6A17Q9H1V8 727 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SPNS1Q9H2V7 528 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 IFT46Q9NQC8 304 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SLC35C2Q9NQQ7 365 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HEBP1Q9NRV9 189 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 TMEM39AQ9NV64 488 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SLC39A1Q9NY26 324 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PPT2Q9UMR5 302 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PLXNA3P51805 1871 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 NEDD8-MDP1E9PL57 170 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 YKT6O15498 198 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SULT1B1O43704 296 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 TLL1O43897 1013 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 FZD6O60353 706 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PRAMEF4O60810 478 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ERN1O75460 977 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 EPORP19235 508 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 LIPAP38571 399 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 DCTP40126 519 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 OR1E2P47887 323 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ARHGDIAP52565 204 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 RAB25P57735 213 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 B4GALNT1Q00973 533 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 MEF2AQ02078 507 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 PTSQ03393 145 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 MAB21L1Q13394 359 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 BTN1A1Q13410 526 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 VEPH1Q14D04 833 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 KIAA0040Q15053 153 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 USP39Q53GS9 565 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 GPRC6AQ5T6X5 926 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PRAMEF9Q5VWM5 478 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 KIAA1614Q5VZ46 1190 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SLC8B1Q6J4K2 584 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PDE12Q6L8Q7 609 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 RETSATQ6NUM9 610 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 TMEM81Q6P7N7 255 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CRTC1Q6UUV9 634 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 KIAA1324Q6UXG2 1013 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 CYP4Z1Q86W10 505 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ZDHHC21Q8IVQ6 265 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ADHFE1Q8IWW8 467 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 GPALPP1Q8IXQ4 340 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 RDH10Q8IZV5 341 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ATG16L2Q8NAA4 619 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 OR5K1Q8NHB7 308 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ENKURQ8TC29 256 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 TSPEARQ8WU66 669 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 NELL1Q92832 810 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PLD4Q96BZ4 506 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 AP2M1Q96CW1 435 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PDLIM5Q96HC4 596 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 DCLRE1CQ96SD1 692 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 COPS8Q99627 209 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 C1QTNF3Q9BXJ4 246 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 OR51B5Q9H339 312 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 EVA1BQ9NVM1 165 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HCFC1R1Q9NWW0 138 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 C1orf109Q9NX04 203 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 DCAF16Q9NXF7 216 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PDP1Q9P0J1 537 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 OARD1Q9Y530 152 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 COL4A4P53420 1690 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 KNL1Q8NG31 2342 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 B4DXG7 233 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CYP7B1O75881 506 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 IFNA14P01570 189 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PROS1P07225 676 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CLEC2LP0C7M8 214 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SDC1P18827 310 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms