RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 A0A1W2PR48 441 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 IL6P05231 212 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 FURINP09958 794 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 KIR3DL1P43629 444 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 ARFIP1P53367 373 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 TRIP6Q15654 476 aaKnown RBP20.06■□□□□ 0.8
CPNE1-204ENST00000397443 CLPPQ16740 277 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-204ENST00000397443 ZNF385BQ569K4 471 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 RBM44Q6ZP01 1051 aaKnown RBP20.06■□□□□ 0.8
CPNE1-204ENST00000397443 TTLL10Q6ZVT0 673 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 GPR180Q86V85 440 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 PPCDCQ96CD2 204 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 DHCR7Q9UBM7 475 aaKnown RBP20.06■□□□□ 0.8
CPNE1-204ENST00000397443 CLCA2Q9UQC9 943 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 GYG2O15488 501 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 CFLARO15519 480 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 PRMT3O60678 531 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 HEPACAMQ14CZ8 416 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 PRSS53Q2L4Q9 553 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 C6orf10Q5SRN2 563 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 MRM1Q6IN84 353 aaKnown RBP20.06■□□□□ 0.8
CPNE1-204ENST00000397443 DNAJC14Q6Y2X3 702 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-204ENST00000397443 IKBIPQ70UQ0 350 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 KLHL29Q96CT2 875 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 PRPF18Q99633 342 aaKnown RBP20.06■□□□□ 0.8
CPNE1-204ENST00000397443 SLC39A3Q9BRY0 314 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 CUTCQ9NTM9 273 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 SLAMF8Q9P0V8 285 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 HCN3Q9P1Z3 774 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 EFCAB7A8K855 629 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 H3BMH7 237 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 FOXS1O43638 330 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 SCELO95171 688 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 AIFM1O95831 613 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 DDCP20711 480 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 PTPN4P29074 926 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 RASSF2P50749 326 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 LIM2P55344 173 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 ACY1Q03154 408 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 ZFP36L1Q07352 338 aaKnown RBP20.05■□□□□ 0.8
CPNE1-204ENST00000397443 TLR1Q15399 786 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 MAPKAPK3Q16644 382 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 MUM1Q2TAK8 710 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 PIP4P1Q86T03 277 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 FAM47BQ8NA70 645 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 STARD8Q92502 1023 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 CIDECQ96AQ7 238 aaPredicted RBP20.05■□□□□ 0.8
CPNE1-204ENST00000397443 EXOSC8Q96B26 276 aaKnown RBP20.05■□□□□ 0.8
CPNE1-204ENST00000397443 MMABQ96EY8 250 aaPredicted RBP20.05■□□□□ 0.8
CPNE1-204ENST00000397443 CTRCQ99895 268 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 DUSP26Q9BV47 211 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 APMAPQ9HDC9 416 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 TMEM45AQ9NWC5 275 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 LYARQ9NX58 379 aaKnown RBP20.05■□□□□ 0.8
CPNE1-204ENST00000397443 MAP10Q9P2G4 905 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 RAPGEFL1Q9UHV5 662 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 LEF1Q9UJU2 399 aaPredicted RBP20.05■□□□□ 0.8
CPNE1-204ENST00000397443 MAU2Q9Y6X3 613 aa20.05■□□□□ 0.8
CPNE1-204ENST00000397443 CNOT1A5YKK6 2376 aaKnown RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 FITM1A5D6W6 292 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 BBIP1A8MTZ0 92 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 PROB1E7EW31 1015 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 ZNF749O43361 778 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 FOXD2O60548 495 aaPredicted RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 ITGAXP20702 1163 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 CPN2P22792 545 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 TRA2BP62995 288 aaKnown RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 MAT1AQ00266 395 aaKnown RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 SRSF11Q05519 484 aaKnown RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 NFYCQ13952 458 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 R3HCC1LQ7Z5L2 792 aaKnown RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 DSELQ8IZU8 1212 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 CSF3RQ99062 836 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 NDC1Q9BTX1 674 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 FAIM2Q9BWQ8 316 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 RBCK1Q9BYM8 510 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 TOR4AQ9NXH8 423 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 DAPP1Q9UN19 280 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 PGRMC2O15173 223 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 PROM1O43490 865 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 HNRNPCL1O60812 293 aaKnown RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 PCSK2P16519 638 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 C21orf58P58505 322 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 SHC2P98077 582 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 INSM1Q01101 510 aaPredicted RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 NHLH1Q02575 133 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 CAPRIN1Q14444 709 aaKnown RBP20.04■□□□□ 0.8
CPNE1-204ENST00000397443 SYT16Q17RD7 645 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 C1orf189Q5VU69 101 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 DHRS13Q6UX07 377 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 TSPEARQ8WU66 669 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 BTBD10Q9BSF8 475 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 SLC7A5P2Q9GIP4 190 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 ATP6V1HQ9UI12 483 aa20.04■□□□□ 0.8
CPNE1-204ENST00000397443 GUCY1B2O75343 617 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 KRT16P08779 473 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 CPOXP36551 454 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 TRA2AQ13595 282 aaKnown RBP eCLIP20.03■□□□□ 0.8
CPNE1-204ENST00000397443 DPY19L1Q2PZI1 675 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 FAM214AQ32MH5 1076 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms