RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CYP4F3Q08477 520 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 SPIDRQ14159 915 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 ZNF425Q6IV72 752 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 PAQR7Q86WK9 346 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 IFNEQ86WN2 208 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 CALHM3Q86XJ0 350 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 FAM129CQ86XR2 697 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 DTWD1Q8N5C7 304 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 TBC1D19Q8N5T2 526 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 OR4K1Q8NGD4 311 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 OR4D9Q8NGE8 314 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 TRAPPC9Q96Q05 1148 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 OR52E6Q96RD3 313 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 SH3GL1Q99961 368 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 COQ10BQ9H8M1 238 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 GORASP2Q9H8Y8 452 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 C8orf4Q9NR00 106 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 SIRT5Q9NXA8 310 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 PDP2Q9P2J9 529 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 VPS29Q9UBQ0 182 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 ANAPC2Q9UJX6 822 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 RUVBL1Q9Y265 456 aaKnown RBP14.19□□□□□ -0.14
CAPN3-207ENST00000397200 PCDHGA11Q9Y5H2 935 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 KLK4Q9Y5K2 254 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 SLC9B1P1A6NJY1 282 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 D6RAR5 112 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 NCK1P16333 377 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 PRPS1L1P21108 318 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 FASP25445 335 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 S100A3P33764 101 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 POLE2P56282 527 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 E2F1Q01094 437 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 FCRL6Q6DN72 434 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 PRSS42Q7Z5A4 293 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 GLRX5Q86SX6 157 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 EPHX4Q8IUS5 362 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 CHERPQ8IWX8 916 aaKnown RBP14.19□□□□□ -0.14
CAPN3-207ENST00000397200 LAS2Q8IYD9 372 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 C19orf47Q8N9M1 422 aaKnown RBP14.19□□□□□ -0.14
CAPN3-207ENST00000397200 TNIP2Q8NFZ5 429 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 CLHC1Q8NHS4 586 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 UBE2E3Q969T4 207 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 ITCHQ96J02 903 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 NSMCE2Q96MF7 247 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 TSSK3Q96PN8 268 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 PITHD1Q9GZP4 211 aaPredicted RBP14.19□□□□□ -0.14
CAPN3-207ENST00000397200 SEMA6AQ9H2E6 1030 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 SPNS1Q9H2V7 528 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 IKZF5Q9H5V7 419 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 TSC22D4Q9Y3Q8 395 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 PCDHGA1Q9Y5H4 931 aa14.19□□□□□ -0.14
CAPN3-207ENST00000397200 IGHV5-51A0A0C4DH38 117 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 C7orf72A4D263 438 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 OR2A25A4D2G3 310 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 FAM220BPB1ANY3 271 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 HAT1O14929 419 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 TOX3O15405 576 aaPredicted RBP14.18□□□□□ -0.14
CAPN3-207ENST00000397200 AKAP10O43572 662 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 ZBTB11O95625 1053 aaPredicted RBP14.18□□□□□ -0.14
CAPN3-207ENST00000397200 CSRP1P21291 193 aaKnown RBP14.18□□□□□ -0.14
CAPN3-207ENST00000397200 ARL4DP49703 201 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 GZMMP51124 257 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 CHN2P52757 468 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 RBBP5Q15291 538 aaKnown RBP14.18□□□□□ -0.14
CAPN3-207ENST00000397200 ATP6AP1Q15904 470 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 CYP51A1Q16850 503 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 GLYATQ6IB77 296 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 MED27Q6P2C8 311 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 TMIGD1Q6UXZ0 262 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 ZNF574Q6ZN55 896 aaPredicted RBP14.18□□□□□ -0.14
CAPN3-207ENST00000397200 TMPRSS9Q7Z410 1059 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 AMIGO2Q86SJ2 522 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 RNF175Q8N4F7 328 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 ZNF740Q8NDX6 193 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 OR7G3Q8NG95 312 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 REPS1Q96D71 796 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 CENPNQ96H22 339 aaPredicted RBP14.18□□□□□ -0.14
CAPN3-207ENST00000397200 OSBPL11Q9BXB4 747 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 CXorf56Q9H5V9 222 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 KAT8Q9H7Z6 458 aaKnown RBP14.18□□□□□ -0.14
CAPN3-207ENST00000397200 RMND5AQ9H871 391 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 PRM3Q9NNZ6 103 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 SOHLH2Q9NX45 425 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 AURKCQ9UQB9 309 aa14.18□□□□□ -0.14
CAPN3-207ENST00000397200 PCNX2A6NKB5 2137 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 GVINP1Q7Z2Y8 2422 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 IGHV5-10-1A0A0J9YXX1 117 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 TRBC2A0A5B9 178 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 FEZF1A0PJY2 475 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 A8MU76 341 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 TXNDC9O14530 226 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 OR1F1O43749 312 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 LINGO3P0C6S8 592 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 PCNAP12004 261 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 MLLT3P42568 568 aaPredicted RBP14.17□□□□□ -0.14
CAPN3-207ENST00000397200 RAE1P78406 368 aaKnown RBP14.17□□□□□ -0.14
CAPN3-207ENST00000397200 TXNL4AP83876 142 aaKnown RBP14.17□□□□□ -0.14
CAPN3-207ENST00000397200 ZIC1Q15915 447 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 GPR155Q7Z3F1 870 aa14.17□□□□□ -0.14
CAPN3-207ENST00000397200 CAMKMTQ7Z624 323 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms