RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 HEPACAM2A8MVW5 462 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 HLA-FP30511 346 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 TUFMP49411 452 aaKnown RBP13.3□□□□□ -0.28
NUP98-204ENST00000397004 TLE2Q04725 743 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 DMC1Q14565 340 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 GLYR1Q49A26 553 aaPredicted RBP13.3□□□□□ -0.28
NUP98-204ENST00000397004 ZNF740Q8NDX6 193 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 ASIC4Q96FT7 647 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 CRELD1Q96HD1 420 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 CFHR5Q9BXR6 569 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 LINC00597Q9H2U6 94 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 RANGRFQ9HD47 186 aaPredicted RBP13.3□□□□□ -0.28
NUP98-204ENST00000397004 IMPAD1Q9NX62 359 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 HCN4Q9Y3Q4 1203 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 TBKBP1A7MCY6 615 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 PSIP1O75475 530 aaKnown RBP13.3□□□□□ -0.28
NUP98-204ENST00000397004 SLITRK5O94991 958 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 CCNB2O95067 398 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 CRISP1P54107 249 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 PSPHP78330 225 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 TEKQ02763 1124 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 MXD1Q05195 221 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 STARD3Q14849 445 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.3□□□□□ -0.28
NUP98-204ENST00000397004 SLC44A2Q8IWA5 706 aaPredicted RBP13.3□□□□□ -0.28
NUP98-204ENST00000397004 UBE2J2Q8N2K1 259 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 AUTS2Q8WXX7 1259 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 ABCG4Q9H172 646 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 SUV39H2Q9H5I1 410 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 SLAMF7Q9NQ25 335 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 CFL2Q9Y281 166 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 WBP11Q9Y2W2 641 aaKnown RBP13.3□□□□□ -0.28
NUP98-204ENST00000397004 GNG14A0A1W2PPG7 69 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 MEIOCA2RUB1 952 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 H7C4K7 107 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 EIF2S1P05198 315 aaKnown RBP13.3□□□□□ -0.28
NUP98-204ENST00000397004 FURINP09958 794 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 TIA1P31483 386 aaKnown RBP eCLIP13.3□□□□□ -0.281e-6■■■■□ 21.9
NUP98-204ENST00000397004 GALK2Q01415 458 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 CRB2Q5IJ48 1285 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 TOR1AIP1Q5JTV8 583 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 SNAP47Q5SQN1 464 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 RETSATQ6NUM9 610 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 Q6ZVL8 140 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 PTCHD4Q6ZW05 846 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 COMMD6Q7Z4G1 85 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 NECTIN4Q96NY8 510 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 OR51B5Q9H339 312 aa13.3□□□□□ -0.28
NUP98-204ENST00000397004 RGS5O15539 181 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 TSPAN6O43657 245 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 ALDH1A1P00352 501 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 SERPINA4P29622 427 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 CDK6Q00534 326 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 COL9A2Q14055 689 aaPredicted RBP13.29□□□□□ -0.28
NUP98-204ENST00000397004 CDK10Q15131 360 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 SLCO4C1Q6ZQN7 724 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 ZNF461Q8TAF7 563 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 CCDC32Q9BV29 185 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 SPATA9Q9BWV2 254 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 OR2B2Q9GZK3 357 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 PLEKHB1Q9UF11 243 aaPredicted RBP13.29□□□□□ -0.28
NUP98-204ENST00000397004 KCND3Q9UK17 655 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 RAB23Q9ULC3 237 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 EIF3FO00303 357 aaPredicted RBP13.29□□□□□ -0.28
NUP98-204ENST00000397004 UGDHO60701 494 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 GADD45GO95257 159 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 TGFB1P01137 390 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 PRKCAP17252 672 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 ETV3P41162 512 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 AP1S2P56377 157 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 CYP4F8P98187 520 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 TEAD4Q15561 434 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 TBRG1Q3YBR2 411 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 ZNF517Q6ZMY9 492 aaPredicted RBP13.29□□□□□ -0.28
NUP98-204ENST00000397004 CMTM8Q8IZV2 173 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 RC3H2Q9HBD1 1191 aaKnown RBP13.29□□□□□ -0.28
NUP98-204ENST00000397004 PAQR5Q9NXK6 330 aaPredicted RBP13.29□□□□□ -0.28
NUP98-204ENST00000397004 NUFIP1Q9UHK0 495 aaKnown RBP13.29□□□□□ -0.28
NUP98-204ENST00000397004 ATP6V1HQ9UI12 483 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 A0A0G2JMP0 313 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 TRBC2A0A5B9 178 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 PLA2G10O15496 165 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 TPST2O60704 377 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 UGT2B17O75795 530 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 TBX6O95947 436 aaPredicted RBP13.29□□□□□ -0.28
NUP98-204ENST00000397004 GSTM1P09488 218 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 GJA1P17302 382 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 CYP2A7P20853 494 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 OLIG3Q7RTU3 272 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 IQCF1Q8N6M8 205 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 SYT14Q8NB59 555 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 PIK3R3Q92569 461 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 SNX18Q96RF0 628 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 TMEM38AQ9H6F2 299 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 ZDHHC6Q9H6R6 413 aa13.29□□□□□ -0.28
NUP98-204ENST00000397004 EXOSC4Q9NPD3 245 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms