RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 IL18R1Q13478 541 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 LRRC32Q14392 662 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 ZIC1Q15915 447 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 FBXO43Q4G163 708 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 WASH2PQ6VEQ5 465 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 CEP68Q76N32 757 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 FAM20CQ8IXL6 584 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 FBXL6Q8N531 539 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 ADAMTS16Q8TE57 1224 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 NMD3Q96D46 503 aaKnown RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 C7orf34Q96L11 122 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 C17orf62Q9BQA9 187 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 SLAMF7Q9NQ25 335 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 TEX10Q9NXF1 929 aaPredicted RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 KIF17Q9P2E2 1029 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 MMP17Q9ULZ9 603 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 LRIT2A6NDA9 550 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 C9P02748 559 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 OPN1SWP03999 348 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 CDH2P19022 906 aaPredicted RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 ELK4P28324 431 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 AKT2P31751 481 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 AHRP35869 848 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 FRKP42685 505 aaPredicted RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 PLA2G16P53816 162 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 SELENOWP63302 87 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 IFI44LQ53G44 452 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 RBM48Q5RL73 367 aaKnown RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 SAXO2Q658L1 398 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 SLC30A9Q6PML9 568 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 RD3Q7Z3Z2 195 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 GALNT15Q8N3T1 639 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 SPPL2AQ8TCT8 520 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 LZICQ8WZA0 190 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 EXOSC8Q96B26 276 aaKnown RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 NEURL3Q96EH8 262 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 ZBED6CLQ96FA7 236 aaPredicted RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 TEFMQ96QE5 360 aaKnown RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 EPYCQ99645 322 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 DPH7Q9BTV6 452 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 FAIM2Q9BWQ8 316 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 ABCG4Q9H172 646 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 PAPOLBQ9NRJ5 636 aaKnown RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 DDX18Q9NVP1 670 aaKnown RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 THUMPD1Q9NXG2 353 aaKnown RBP14.23□□□□□ -0.13
CBX3-202ENST00000396386 SPHK1Q9NYA1 384 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 MTCH2Q9Y6C9 303 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 CEPT1Q9Y6K0 416 aa14.23□□□□□ -0.13
CBX3-202ENST00000396386 FANCMQ8IYD8 2048 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 SNRNP200O75643 2136 aaKnown RBP14.22□□□□□ -0.13
CBX3-202ENST00000396386 A0A0G2JN53 185 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 LOC100130705A0A1B0GUX0 176 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 TNFRSF10CO14798 259 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 BCKDKO14874 412 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 SLC16A6O15403 523 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 IFNA14P01570 189 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 CHRM5P08912 532 aaPredicted RBP14.22□□□□□ -0.13
CBX3-202ENST00000396386 DRD2P14416 443 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 GABRG2P18507 467 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 AK4P27144 223 aaPredicted RBP14.22□□□□□ -0.13
CBX3-202ENST00000396386 ACTR1BP42025 376 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 PCBP4P57723 403 aaKnown RBP14.22□□□□□ -0.13
CBX3-202ENST00000396386 ACTR1AP61163 376 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 HSPB3Q12988 150 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 ADPRMQ3LIE5 342 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 TPRG1LQ5T0D9 272 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 EYSQ5T1H1 3165 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 FAM180BQ6P0A1 224 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 B3GNT6Q6ZMB0 384 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 GPR141Q7Z602 305 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 AMIGO1Q86WK6 493 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 SLC44A3Q8N4M1 653 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 TMEM145Q8NBT3 493 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 LCN9Q8WX39 176 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 JPH3Q8WXH2 748 aaPredicted RBP14.22□□□□□ -0.13
CBX3-202ENST00000396386 HDAC2Q92769 488 aaKnown RBP14.22□□□□□ -0.13
CBX3-202ENST00000396386 TAMM41Q96BW9 452 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 BMFQ96LC9 184 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 BARD1Q99728 777 aaKnown RBP14.22□□□□□ -0.13
CBX3-202ENST00000396386 SARGQ9BW04 601 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 AICDAQ9GZX7 198 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 RUBCNLQ9H714 662 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 KCNK12Q9HB15 430 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 VCX3AQ9NNX9 186 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 OR6C2Q9NZP2 312 aa14.22□□□□□ -0.13
CBX3-202ENST00000396386 PDP1Q9P0J1 537 aaPredicted RBP14.22□□□□□ -0.13
CBX3-202ENST00000396386 ISM1B1AKI9 464 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 TMEM229AB2RXF0 380 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 EML2O95834 649 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 YAP1P46937 504 aaKnown RBP14.21□□□□□ -0.13
CBX3-202ENST00000396386 ARFIP1P53367 373 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 LAPTM4AQ15012 233 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 TCEA2Q15560 299 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 SPDYE7PQ495Y7 208 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 IQCCQ4KMZ1 466 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 CRB2Q5IJ48 1285 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 TOR1AIP1Q5JTV8 583 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 ZNF691Q5VV52 312 aa14.21□□□□□ -0.13
CBX3-202ENST00000396386 KDM4DQ6B0I6 523 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms