RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CKAP5Q14008 2032 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 HMX3A6NHT5 357 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 CA12O43570 354 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 SPAM1P38567 509 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 P2RX3P56373 397 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 RPS13P62277 151 aaKnown RBP13.7□□□□□ -0.22
CLIP2-203ENST00000395060 PSPHP78330 225 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 EFR3AQ14156 821 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 SLC5A12Q1EHB4 618 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 C5orf22Q49AR2 442 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 VPS37AQ8NEZ2 397 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 OR51B5Q9H339 312 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 PLCXD1Q9NUJ7 323 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 ACER3Q9NUN7 267 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 ASIC5Q9NY37 505 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 SCN10AQ9Y5Y9 1956 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 TDRD15B5MCY1 1934 aaKnown RBP13.7□□□□□ -0.22
CLIP2-203ENST00000395060 CHD5Q8TDI0 1954 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 LOC102723532A0A0G2JNH3 316 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 SCAMP2O15127 329 aaKnown RBP13.69□□□□□ -0.22
CLIP2-203ENST00000395060 TLX2O43763 284 aaPredicted RBP13.69□□□□□ -0.22
CLIP2-203ENST00000395060 IGHA2P01877 340 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 BDKRB1P46663 353 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 IRF5Q13568 498 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 QPRTQ15274 297 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 ATAT1Q5SQI0 421 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 HECTD3Q5T447 861 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 FRMPD2BQ6IN97 320 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 DENND6BQ8NEG7 585 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 FLCNQ8NFG4 579 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 DNAJB8Q8NHS0 232 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 DEDD2Q8WXF8 326 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 C5AR2Q9P296 337 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 NDRG2Q9UN36 371 aaKnown RBP13.69□□□□□ -0.22
CLIP2-203ENST00000395060 SSR3Q9UNL2 185 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 TLR4O00206 839 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 MYL12BO14950 172 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 CRISP1P54107 249 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 LARS2Q15031 903 aaKnown RBP13.69□□□□□ -0.22
CLIP2-203ENST00000395060 P2RY14Q15391 338 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 ADGRF1Q5T601 910 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 PLET1Q6UQ28 207 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 DPY19L3Q6ZPD9 716 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 TMPRSS11BQ86T26 416 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 CRELD1Q96HD1 420 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 MAP6Q96JE9 813 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 RACGAP1Q9H0H5 632 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 FKBP14Q9NWM8 211 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 UCKL1Q9NWZ5 548 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 PADI2Q9Y2J8 665 aa13.69□□□□□ -0.22
CLIP2-203ENST00000395060 OR1D2P34982 312 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 ACLYP53396 1101 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 PFN3P60673 137 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 SMAD3P84022 425 aaKnown RBP13.68□□□□□ -0.22
CLIP2-203ENST00000395060 CDK6Q00534 326 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 MTAPQ13126 283 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 GATAD2BQ8WXI9 593 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 LINC01599Q8WXQ3 324 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 CCDC120Q96HB5 630 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 RNF170Q96K19 258 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 UROC1Q96N76 676 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 HDHD5Q9BXW7 423 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 MIXL1Q9H2W2 232 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 RNF121Q9H920 327 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 FAM120CQ9NX05 1096 aaKnown RBP13.68□□□□□ -0.22
CLIP2-203ENST00000395060 GPR52Q9Y2T5 361 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 HCN4Q9Y3Q4 1203 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 PCDHGB2Q9Y5G2 931 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 A3GALT2U3KPV4 340 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 PLXNA4Q9HCM2 1894 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 CD9P21926 228 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 CRYBB2P43320 205 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 VEZF1Q14119 521 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 RNASE12Q5GAN4 147 aaKnown RBP13.68□□□□□ -0.22
CLIP2-203ENST00000395060 WDR45BQ5MNZ6 344 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 SAXO2Q658L1 398 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 AMIGO1Q86WK6 493 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 KRT73Q86Y46 540 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 HUS1BQ8NHY5 278 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 PHF21AQ96BD5 680 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 TBC1D20Q96BZ9 403 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 OMA1Q96E52 524 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 HTATIP2Q9BUP3 242 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 TSSK6Q9BXA6 273 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 MCUBQ9NWR8 336 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 GSAPA4D1B5 854 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 FZD6O60353 706 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 PLOD3O60568 738 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 UGT2B17O75795 530 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 NSG1P42857 185 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 CTSOP43234 321 aaPredicted RBP13.68□□□□□ -0.22
CLIP2-203ENST00000395060 RAB8AP61006 207 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 CHRNEQ04844 493 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 SREBF2Q12772 1141 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 LRRC32Q14392 662 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 SEC23BQ15437 767 aa13.68□□□□□ -0.22
CLIP2-203ENST00000395060 CRTC2Q53ET0 693 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms