RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TSPAN10Q9H1Z9 355 aaPredicted RBP14.25□□□□□ -0.13
CCDC50-201ENST00000392455 DPEP2Q9H4A9 486 aa14.25□□□□□ -0.13
CCDC50-201ENST00000392455 CCDC163A0A0D9SF12 145 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 M0R2N6 131 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 SNAPINO95295 136 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ZNF43P17038 809 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 FXYD6P3P58550 94 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ARL5BQ96KC2 179 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 EBPLQ9BY08 206 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 METTL7AQ9H8H3 244 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 NDRG2Q9UN36 371 aaKnown RBP14.24□□□□□ -0.13
CCDC50-201ENST00000392455 FLT3LGP49771 235 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 RAB30Q15771 203 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 TMEM41BQ5BJD5 291 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 XYLT1Q86Y38 959 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 GTPBP8Q8N3Z3 284 aaPredicted RBP14.24□□□□□ -0.13
CCDC50-201ENST00000392455 FAM160A2Q8N612 972 aaPredicted RBP14.24□□□□□ -0.13
CCDC50-201ENST00000392455 FRZBQ92765 325 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 EPHB6O15197 1021 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ALDOBP05062 364 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 C2P06681 752 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 PTPN2P17706 415 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 RPS3P23396 243 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCDC50-201ENST00000392455 TUSC3Q13454 348 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ZNF674Q2M3X9 581 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 GPR157Q5UAW9 335 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 LRRC55Q6ZSA7 311 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 OTOP2Q7RTS6 562 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 NSMAFQ92636 917 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.24□□□□□ -0.13
CCDC50-201ENST00000392455 CNTN6Q9UQ52 1028 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 PCDH7O60245 1069 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 RGS9O75916 674 aaPredicted RBP14.24□□□□□ -0.13
CCDC50-201ENST00000392455 TNFP01375 233 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 NOXRED1Q6NXP6 359 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 B3GLCTQ6Y288 498 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 MON1BQ7L1V2 547 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 DPY19L4Q7Z388 723 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 C3orf49Q96BT1 292 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 SLC29A3Q9BZD2 475 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ATG5Q9H1Y0 275 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 VPS29Q9UBQ0 182 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 K7EPI3 171 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 CHRNB1P11230 501 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 CLCNKBP51801 687 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 NOGQ13253 232 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 TRAM2Q15035 370 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 FUNDC2Q9BWH2 189 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 OR2AG1Q9H205 316 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 FAM120CQ9NX05 1096 aaKnown RBP14.24□□□□□ -0.13
CCDC50-201ENST00000392455 SHROOM3Q8TF72 1996 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ROBO3Q96MS0 1386 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 H2AFB2P0C5Z0 115 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 BTBD16Q32M84 506 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 EEF1DP3Q658K8 133 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ZCCHC10Q8TBK6 192 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 EPHA6Q9UF33 1036 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 SERTAD3Q9UJW9 196 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 ASB4Q9Y574 426 aa14.24□□□□□ -0.13
CCDC50-201ENST00000392455 KCNC4Q03721 635 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 CCINQ13939 588 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 ZNF366Q8N895 744 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 SLC25A36Q96CQ1 311 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 ZBED3Q96IU2 234 aaPredicted RBP14.23□□□□□ -0.13
CCDC50-201ENST00000392455 HS6ST2Q96MM7 605 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 HNRNPABQ99729 332 aaKnown RBP14.23□□□□□ -0.13
CCDC50-201ENST00000392455 DPYSL5Q9BPU6 564 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 KLHL21Q9UJP4 597 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 RNF212BA8MTL3 300 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 TPST2O60704 377 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 GLSO94925 669 aaPredicted RBP14.23□□□□□ -0.13
CCDC50-201ENST00000392455 AKR1C2P52895 323 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 TAS2R39P59534 338 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 RPS3AP61247 264 aaKnown RBP14.23□□□□□ -0.13
CCDC50-201ENST00000392455 EXOC3L2Q2M3D2 409 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 SH3D19Q5HYK7 790 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 KIAA1161Q6NSJ0 714 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 IDO2Q6ZQW0 420 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 SNX29P2Q8IUI4 249 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 LGI4Q8N135 537 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 TCEANCQ8N8B7 351 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 NLGN2Q8NFZ4 835 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 CHTF18Q8WVB6 975 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 BCL7BQ9BQE9 202 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 KCNJ16Q9NPI9 418 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 KCNIP2Q9NS61 270 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 TIMM22Q9Y584 194 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 A0A1W2PRB8 838 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 MEGF11A6BM72 1044 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 INSIG1O15503 277 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 BCAS2O75934 225 aaPredicted RBP14.23□□□□□ -0.13
CCDC50-201ENST00000392455 CASP7P55210 303 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 CLEC6AQ6EIG7 209 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 PAOXQ6QHF9 649 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 GNPDA2Q8TDQ7 276 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 PPP4R1LQ9P1A2 415 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 RCCD1A6NED2 376 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 ZNF850A8MQ14 1090 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 GPR137BO60478 399 aa14.23□□□□□ -0.13
CCDC50-201ENST00000392455 SPATA31C1P0DKV0 1188 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms