RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 LILRA5A6NI73 299 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 ARPC2O15144 300 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 DNAJB6O75190 326 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 FAM58BPP0C7Q3 252 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 SLC35G6P0C7Q6 338 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 DDCP20711 480 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 TRPC1P48995 793 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 ARRB1P49407 418 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 OR1D5P58170 312 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 STXBP1P61764 594 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 HBA1P69905 142 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 RGS1Q08116 209 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 GAB1Q13480 694 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 IZUMO2Q6UXV1 221 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 IKBIPQ70UQ0 350 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 ZNF551Q7Z340 670 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 SHISA5Q8N114 240 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 SDR16C5Q8N3Y7 309 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 AVL9Q8NBF6 648 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 OR4A15Q8NGL6 344 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 B4GALNT2Q8NHY0 566 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 FAM110BQ8TC76 370 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 MIPOL1Q8TD10 442 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 UTP15Q8TED0 518 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 NCSTNQ92542 709 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 EXOSC8Q96B26 276 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 TGM7Q96PF1 710 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 VCX3BQ9H321 246 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 SEMA6CQ9H3T2 930 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 VCX3AQ9NNX9 186 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 ADAM29Q9UKF5 820 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 MAPRE3Q9UPY8 281 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 LRCH1Q9Y2L9 728 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 ATG4BQ9Y4P1 393 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 KLK4Q9Y5K2 254 aa11.58□□□□□ -0.56
SPTBN1-203ENST00000389980 GPR179Q6PRD1 2367 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 RNASET2O00584 256 aaKnown RBP11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 COQ9O75208 318 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 ENGP17813 658 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 CASP9P55211 416 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 VSX2P58304 361 aaPredicted RBP11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 BNIP2Q12982 314 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 SLC9A5Q14940 896 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 HLA-BQ31612 363 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 NDUFAF5Q5TEU4 345 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 ANXA8L1Q5VT79 327 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 KLHL35Q6PF15 583 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 Q8N9G6 341 aaPredicted RBP11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 C19orf47Q8N9M1 422 aaKnown RBP11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 FAM47BQ8NA70 645 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 VPS37AQ8NEZ2 397 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 NT5CQ8TCD5 201 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 RERGQ96A58 199 aaPredicted RBP11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 KAT8Q9H7Z6 458 aaKnown RBP11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 UCK1Q9HA47 277 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 SLAMF7Q9NQ25 335 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 ATAD3AQ9NVI7 634 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 PDP2Q9P2J9 529 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 ANKMY1Q9P2S6 941 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 BTNL2Q9UIR0 455 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 ASB4Q9Y574 426 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 A0A1W2PR48 441 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 ZNF860A6NHJ4 632 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 CLIC1O00299 241 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 NTRK1P04629 796 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 RXRGP48443 463 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 HEPACAMQ14CZ8 416 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 AMZ1Q400G9 498 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 DEFB134Q4QY38 66 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 C18orf63Q68DL7 685 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 RNF44Q7L0R7 432 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 PRSS41Q7RTY9 318 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 DTWD1Q8N5C7 304 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 ARL10Q8N8L6 244 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 OR2T12Q8NG77 320 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 DNAJB8Q8NHS0 232 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 GAL3ST3Q96A11 431 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 MTERF3Q96E29 417 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 LRGUKQ96M69 825 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 MAPKAP1Q9BPZ7 522 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 SUSD2Q9UGT4 822 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 ACSL6Q9UKU0 697 aa11.57□□□□□ -0.56
SPTBN1-203ENST00000389980 A0A1W2PRB8 838 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 PGRMC2O15173 223 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 EPN2O95208 641 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 IL1RNP18510 177 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 PEX2P28328 305 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 HTR1EP28566 365 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 EPHA8P29322 1005 aaPredicted RBP11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 RPL3P39023 403 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 OLR1P78380 273 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 MRM1Q6IN84 353 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 TMEM154Q6P9G4 183 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 C11orf74Q86VG3 221 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 PTRH1Q86Y79 214 aaKnown RBP11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 CAMKVQ8NCB2 501 aa11.56□□□□□ -0.56
SPTBN1-203ENST00000389980 SRFBP1Q8NEF9 429 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms