RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 WDR53Q7Z5U6 358 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 VANGL1Q8TAA9 524 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 WDR70Q9NW82 654 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 EHD3Q9NZN3 535 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 STOX2Q9P2F5 926 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 PLAGL1Q9UM63 463 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 A8MV72 311 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 SCAMP1O15126 338 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 COPZ1P61923 177 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 SCARB2Q14108 478 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 MPEG1Q2M385 716 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 NXNL2Q5VZ03 156 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 RNF130Q86XS8 419 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 KBTBD8Q8NFY9 601 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 MRGPRX3Q96LB0 322 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 IL4I1Q96RQ9 567 aa15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 TP63Q9H3D4 680 aaPredicted RBP15.55■□□□□ 0.08
NKX3-1-201ENST00000380871 LINC00854A0A1B0GVQ3 168 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 PRRT4C9JH25 899 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 ZW10O43264 779 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 SOX3P41225 446 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 AP1S2P56377 157 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 CSNK2BP67870 215 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 PRKCDQ05655 676 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 IFI44LQ53G44 452 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 ZMAT1Q5H9K5 638 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 KLHL17Q6TDP4 642 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 LIPIQ6XZB0 460 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 GLYATL1Q969I3 302 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 NEIL2Q969S2 332 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 RSPRY1Q96DX4 576 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 TBC1D14Q9P2M4 693 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 KLHL3Q9UH77 587 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 BTNL2Q9UIR0 455 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 TMEM98Q9Y2Y6 226 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 UGT2A1Q9Y4X1 527 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 NOTCH4Q99466 2003 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 TNFRSF21O75509 655 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 PTTG1O95997 202 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 MPC1LP0DKB6 136 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 CKMT1AP12532 417 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 ZNF8P17098 575 aaPredicted RBP15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 ZNF77Q15935 545 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 SSX1Q16384 188 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 ZNF805Q5CZA5 627 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 ZNF513Q8N8E2 541 aaPredicted RBP15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 AQP11Q8NBQ7 271 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 BTN2A2Q8WVV5 523 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 SMG7Q92540 1137 aaKnown RBP15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 IL17FQ96PD4 163 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 MGLLQ99685 303 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 POFUT2Q9Y2G5 429 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 PCM1Q15154 2024 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 ALPK3Q96L96 1907 aa15.54■□□□□ 0.08
NKX3-1-201ENST00000380871 OTOL1A6NHN0 477 aaPredicted RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 ARHGAP33O14559 1287 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 EFCAB14O75071 495 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 CYP17A1P05093 508 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 ZNF45Q02386 682 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 SLC5A12Q1EHB4 618 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 PLEKHS1Q5SXH7 462 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 TUBA3EQ6PEY2 450 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 TTC23LQ6PF05 361 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 BCDIN3DQ7Z5W3 292 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 ATCAYQ86WG3 371 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 VPS37AQ8NEZ2 397 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 NEDD4LQ96PU5 975 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 CEP44Q9C0F1 390 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 NUAK2Q9H093 628 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 C11orf16Q9NQ32 467 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 ACER3Q9NUN7 267 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 CCDC59Q9P031 241 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 DNAH14Q0VDD8 3507 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 DYRK3O43781 588 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 GPX5O75715 221 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 MED26O95402 600 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 SOX14O95416 240 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 CATP04040 527 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 ADH5P11766 374 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 IMPA1P29218 277 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 SP140Q13342 867 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 MADCAM1Q13477 382 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 IRF3Q14653 427 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 MLIPQ5VWP3 458 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 ERAP2Q6P179 960 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 WDR36Q8NI36 951 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 WDR48Q8TAF3 677 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 CLP1Q92989 425 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 EFHD2Q96C19 240 aaPredicted RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 PKP4Q99569 1192 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 KLHL42Q9P2K6 505 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 RAB23Q9ULC3 237 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 DPM1O60762 260 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 ATG13O75143 517 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 TGFB1P01137 390 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 GASTP01350 101 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 AZGP1P25311 298 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 CNR2P34972 360 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 GPR1P46091 355 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 PRIM2P49643 509 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms