RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CYP4F2P78329 520 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 PRDX1Q06830 199 aaKnown RBP12.04□□□□□ -0.48
VPS16-202ENST00000380445 GPR107Q5VW38 600 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 MTSS1LQ765P7 747 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 GALNT5Q7Z7M9 940 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 RNF130Q86XS8 419 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 SCAIQ8N9R8 606 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 TTC29Q8NA56 475 aaPredicted RBP12.04□□□□□ -0.48
VPS16-202ENST00000380445 OR5P2Q8WZ92 322 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 TM4SF18Q96CE8 201 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 ZNF764Q96H86 408 aaPredicted RBP12.04□□□□□ -0.48
VPS16-202ENST00000380445 COX4I2Q96KJ9 171 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 CAMK1GQ96NX5 476 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 F2RL3Q96RI0 385 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 MVB12BQ9H7P6 319 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 SCML1Q9UN30 329 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 MAP4K5Q9Y4K4 846 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 NUMA1Q14980 2115 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 DOCK8Q8NF50 2099 aa12.04□□□□□ -0.48
VPS16-202ENST00000380445 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 CACNB4O00305 520 aaPredicted RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 SLC1A7O00341 560 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 OR1F1O43749 312 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 CLEC3AO75596 197 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 GRK3P35626 688 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 CRYBA2P53672 197 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 TRA2BP62995 288 aaKnown RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 GRSF1Q12849 480 aaKnown RBP eCLIP12.03□□□□□ -0.48
VPS16-202ENST00000380445 IQCCQ4KMZ1 466 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 CRB2Q5IJ48 1285 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 NFKBIDQ8NI38 313 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 FBLIM1Q8WUP2 373 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 KLK6Q92876 244 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 FAM131CQ96AQ9 280 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 RIPOR3Q96MK2 946 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 ZNF717Q9BY31 904 aaPredicted RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 BTBD1Q9H0C5 482 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 IMP3Q9NV31 184 aaKnown RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 GMPPBQ9Y5P6 360 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 PRR23AA6NEV1 266 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 EPOPA6NHQ4 379 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 M0QX08 132 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 PDPK1O15530 556 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 RNGTTO60942 597 aaKnown RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 MITFO75030 526 aaPredicted RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 GCM2O75603 506 aaPredicted RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 CEACAM5P06731 702 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 ARAFP10398 606 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 PSMB5P28074 263 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 MANFP55145 182 aaKnown RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 CXCR4P61073 352 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 CDK5R2Q13319 367 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 RAPSNQ13702 412 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 CTU2Q2VPK5 515 aaKnown RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 FAHD1Q6P587 224 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 ADCK2Q7Z695 626 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 TSPYL5Q86VY4 417 aaPredicted RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 SPARTQ8N0X7 666 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 LINC01555Q8NAE3 123 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 OR13F1Q8NGS4 319 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 OR2L8Q8NGY9 312 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 GABRG3Q99928 467 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 SORBS1Q9BX66 1292 aaKnown RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 FANCEQ9HB96 536 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 LTB4R2Q9NPC1 389 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 MOSPD1Q9UJG1 213 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.03□□□□□ -0.48
VPS16-202ENST00000380445 TPRKBQ9Y3C4 175 aa12.03□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3DA0A087WVF3 549 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3IA0A087WXS9 549 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3EA0A087X179 549 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3KA0A087X1G2 549 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 FEZF1A0PJY2 475 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3FA6NER0 549 aaPredicted RBP12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3LB9A6J9 549 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 NDUFS4O43181 175 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 ADAM23O75077 832 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBX6O95947 436 aaPredicted RBP12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3HP0C7X1 549 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 RRM2P31350 389 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 POLR2IP36954 125 aaKnown RBP12.02□□□□□ -0.48
VPS16-202ENST00000380445 SOX9P48436 509 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TMBIM6P55061 237 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 DSTNP60981 165 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 CSNK1G2P78368 415 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 SIM2Q14190 667 aaPredicted RBP12.02□□□□□ -0.48
VPS16-202ENST00000380445 MLF2Q15773 248 aaPredicted RBP12.02□□□□□ -0.48
VPS16-202ENST00000380445 KIAA1614Q5VZ46 1190 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3GQ6DHY5 549 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3CQ6IPX1 549 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D3Q8IZP1 549 aaPredicted RBP12.02□□□□□ -0.48
VPS16-202ENST00000380445 TBC1D19Q8N5T2 526 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 OR5AK3PQ8NH89 298 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 BARD1Q99728 777 aaKnown RBP12.02□□□□□ -0.48
VPS16-202ENST00000380445 APOOQ9BUR5 198 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 MKRN2Q9H000 416 aaKnown RBP12.02□□□□□ -0.48
VPS16-202ENST00000380445 SCN3BQ9NY72 215 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 KCNK6Q9Y257 313 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.48
VPS16-202ENST00000380445 SNX8Q9Y5X2 465 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms