RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 FHP07954 510 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 WT1P19544 449 aaPredicted RBP11.25□□□□□ -0.61
PCNA-201ENST00000379143 NR1D1P20393 614 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 MMP11P24347 488 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 CERS1P27544 350 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 HTR6P50406 440 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 EMP2P54851 167 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 LIM2P55344 173 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 RAB38P57729 211 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 CXADRP78310 365 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 OLR1P78380 273 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 CDC20Q12834 499 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 SLAMF1Q13291 335 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 ERV3-1Q14264 604 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 MINDY4Q4G0A6 757 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 TCHHL1Q5QJ38 904 aaPredicted RBP11.25□□□□□ -0.61
PCNA-201ENST00000379143 MFSD4BQ5TF39 518 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 KANK2Q63ZY3 851 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 CLEC6AQ6EIG7 209 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 CYP20A1Q6UW02 462 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 ZNF793Q6ZN11 406 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 ZC3H7AQ8IWR0 971 aaKnown RBP11.25□□□□□ -0.61
PCNA-201ENST00000379143 METTL4Q8N3J2 472 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 ARFGAP2Q8N6H7 521 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 PEX11GQ96HA9 241 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 HBEGFQ99075 208 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
PCNA-201ENST00000379143 ACPTQ9BZG2 426 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 MANSC1Q9H8J5 431 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 CPNE5Q9HCH3 593 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 TNFRSF12AQ9NP84 129 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 THAP1Q9NVV9 213 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 LYARQ9NX58 379 aaKnown RBP11.25□□□□□ -0.61
PCNA-201ENST00000379143 PHF11Q9UIL8 331 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 C3orf18Q9UK00 162 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 MKL2Q9ULH7 1088 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 DNAJC15Q9Y5T4 150 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 CFAP46Q8IYW2 2715 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 PEX12O00623 359 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 CLDN4O14493 209 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 NKX2-8O15522 239 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 GUCY1B2O75343 617 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 UMODP07911 640 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 SERPINB3P29508 390 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 TLX1P31314 330 aaPredicted RBP11.24□□□□□ -0.61
PCNA-201ENST00000379143 ARRB2P32121 409 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 BSGP35613 385 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 BUD31P41223 144 aaPredicted RBP11.24□□□□□ -0.61
PCNA-201ENST00000379143 BST1Q10588 318 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 TBL3Q12788 808 aaKnown RBP11.24□□□□□ -0.61
PCNA-201ENST00000379143 IL10RAQ13651 578 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 RUNX2Q13950 521 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 SHISA6Q6ZSJ9 500 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 COMMD6Q7Z4G1 85 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 GPR180Q86V85 440 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 ZNF595Q8IYB9 648 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 PRSS58Q8IYP2 241 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 ADAMTS17Q8TE56 1095 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 TWIST2Q8WVJ9 160 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 METTL21AQ8WXB1 218 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 ZNF717Q9BY31 904 aaPredicted RBP11.24□□□□□ -0.61
PCNA-201ENST00000379143 INTS9Q9NV88 658 aaKnown RBP11.24□□□□□ -0.61
PCNA-201ENST00000379143 ZDHHC2Q9UIJ5 367 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 HAO1Q9UJM8 370 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 POLHQ9Y253 713 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 FIS1Q9Y3D6 152 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 MMACHCQ9Y4U1 282 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 SCN3AQ9NY46 2000 aa11.24□□□□□ -0.61
PCNA-201ENST00000379143 SEC16AO15027 2179 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 A0A0A6YYD5 115 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 CDC14CA4D256 554 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 NPIPB8E9PQR5 432 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 ITM2AO43736 263 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 PRMT3O60678 531 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 SNNO75324 88 aaPredicted RBP11.23□□□□□ -0.61
PCNA-201ENST00000379143 LYPLA1O75608 230 aaPredicted RBP11.23□□□□□ -0.61
PCNA-201ENST00000379143 RSL1D1O76021 490 aaKnown RBP11.23□□□□□ -0.61
PCNA-201ENST00000379143 FAM58BPP0C7Q3 252 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 PRKAR1AP10644 381 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 CHN1P15882 459 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 PRPH2P23942 346 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 OTX2P32243 289 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 GSTM5P46439 218 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 RPL14P50914 215 aaKnown RBP11.23□□□□□ -0.61
PCNA-201ENST00000379143 HSD17B7P56937 341 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 TRA2BP62995 288 aaKnown RBP11.23□□□□□ -0.61
PCNA-201ENST00000379143 HMGCS1Q01581 520 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 ACSM2AQ08AH3 577 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 UGT3A2Q3SY77 523 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 SPDYAQ5MJ70 313 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 CCNYL2Q5T2Q4 361 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 CES4AQ5XG92 561 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 ACSM2BQ68CK6 577 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 MRM1Q6IN84 353 aaKnown RBP11.23□□□□□ -0.61
PCNA-201ENST00000379143 SCIMPQ6UWF3 145 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 QSOX2Q6ZRP7 698 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 GPR155Q7Z3F1 870 aa11.23□□□□□ -0.61
PCNA-201ENST00000379143 LAPTM4BQ86VI4 370 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms