RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RUNX2Q13950 521 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 TERF2Q15554 542 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 TTC27Q6P3X3 843 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 NXPE4Q6UWF7 544 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 TRILQ7L0X0 811 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 THOC6Q86W42 341 aaKnown RBP16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 FAM109AQ8N4B1 249 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 MCUQ8NE86 351 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 GOT1L1Q8NHS2 421 aaPredicted RBP16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 PELI2Q9HAT8 420 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 CLK4Q9HAZ1 481 aaKnown RBP16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 ADAP2Q9NPF8 381 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 LZTFL1Q9NQ48 299 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 CRIM1Q9NZV1 1036 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 MYOTQ9UBF9 498 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 CLCA3PQ9Y6N3 262 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 FLNAP21333 2647 aaKnown RBP16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 OR14I1A6ND48 311 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 TMEM200CA6NKL6 621 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 CLDN4O14493 209 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 BANF1O75531 89 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 SERPINA6P08185 405 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 SMIM10L1P0DMW3 83 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 GABRB3P28472 473 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 GPR143P51810 404 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 RAB38P57729 211 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 STXBP1P61764 594 aaKnown RBP16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 CRYMQ14894 314 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 C1orf185Q5T7R7 199 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 NDUFAF5Q5TEU4 345 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 FBXW10Q5XX13 1052 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 HSDL2Q6YN16 418 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 GPALPP1Q8IXQ4 340 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 ZNF321PQ8N8H1 164 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 SMIM10Q96HG1 83 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 SCYL1Q96KG9 808 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 SIGLEC10Q96LC7 697 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 FAM173AQ9BQD7 235 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 OR8D2Q9GZM6 311 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 PRM3Q9NNZ6 103 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 HOMER3Q9NSC5 361 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 IKZF3Q9UKT9 509 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 SLC22A14Q9Y267 594 aa16.48■□□□□ 0.23
PDLIM4-202ENST00000379018 PROM1O43490 865 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 B3GALT2O43825 422 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 CNR1P21554 472 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 HK2P52789 917 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 PLA2G16P53816 162 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 SLC25A35Q3KQZ1 300 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 WLSQ5T9L3 541 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 RTL4Q6ZR62 310 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 TMEM132CQ8N3T6 1108 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 GAL3ST3Q96A11 431 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 MAGOHBQ96A72 148 aaKnown RBP16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 CSF3RQ99062 836 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 EGFL8Q99944 293 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 IL1RL2Q9HB29 575 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 PPANQ9NQ55 473 aaKnown RBP16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 RASSF1Q9NS23 344 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 SACM1LQ9NTJ5 587 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 TUBA8Q9NY65 449 aaPredicted RBP16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 MRPS33Q9Y291 106 aaKnown RBP16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 CLDN16Q9Y5I7 305 aa16.47■□□□□ 0.23
PDLIM4-202ENST00000379018 ARHGAP21Q5T5U3 1957 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 NPEPPSL1A6NEC2 478 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 AQP7O14520 342 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 GLSO94925 669 aaPredicted RBP16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 IGHG3P01860 377 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 AHSGP02765 367 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 P04436 131 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 CCL3P10147 92 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 PGAM1P18669 254 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 TNNI3P19429 210 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 CERS1P27544 350 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 HNRNPH1P31943 449 aaKnown RBP16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 HSD17B7P56937 341 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 CDC20BQ86Y33 519 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 KLHDC8AQ8IYD2 350 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 GABPB2Q8TAK5 448 aaPredicted RBP16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 SARAFQ96BY9 339 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 RUNDC3BQ96NL0 473 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 SEMA4BQ9NPR2 832 aaPredicted RBP16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 DMRT3Q9NQL9 472 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 TRMT1Q9NXH9 659 aaKnown RBP16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 PPIEQ9UNP9 301 aaKnown RBP16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 KCNE2Q9Y6J6 123 aa16.46■□□□□ 0.23
PDLIM4-202ENST00000379018 MPDZO75970 2070 aa16.46■□□□□ 0.22
PDLIM4-202ENST00000379018 WDR1O75083 606 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 CCDC175P0C221 793 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 PIGAP37287 484 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 MAGEA3P43357 314 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 ADAM8P78325 824 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 ID2Q02363 134 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 SLBPQ14493 270 aaKnown RBP eCLIP16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 SLC10A1Q14973 349 aa16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 ELAVL1Q15717 326 aaKnown RBP16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 C18orf21Q32NC0 220 aaPredicted RBP16.45■□□□□ 0.22
PDLIM4-202ENST00000379018 SBSNQ6UWP8 590 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms