RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ALOX12P18054 663 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 MAGP20916 626 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 CBLP22681 906 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 CRISP1P54107 249 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 PCBP3P57721 371 aaKnown RBP13.9□□□□□ -0.18
MSH5-201ENST00000375703 CARTPTQ16568 116 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 DUSP7Q16829 419 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 KLHL17Q6TDP4 642 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 ZNF367Q7RTV3 350 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 HEATR4Q86WZ0 1026 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 TAGAPQ8N103 731 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 ZNF557Q8N988 423 aaPredicted RBP13.9□□□□□ -0.18
MSH5-201ENST00000375703 SLC5A11Q8WWX8 675 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 MTERF3Q96E29 417 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 MGLLQ99685 303 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 SGPP1Q9BX95 441 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 CDCA4Q9BXL8 241 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 SLC6A16Q9GZN6 736 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 SPNS1Q9H2V7 528 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 ITM2BQ9Y287 266 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 SNX8Q9Y5X2 465 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 HTR3EA5X5Y0 456 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 TPD52L2O43399 206 aaKnown RBP13.9□□□□□ -0.18
MSH5-201ENST00000375703 MPZL2O60487 215 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 CXCL14O95715 111 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 IFNW1P05000 195 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 IL3P08700 152 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 CHMP24386 653 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 SOX6P35712 828 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 MMP12P39900 470 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 TAP2Q03519 686 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 TLE2Q04725 743 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 ERAP2Q6P179 960 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 UNC5DQ6UXZ4 953 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 SLC44A2Q8IWA5 706 aaPredicted RBP13.9□□□□□ -0.18
MSH5-201ENST00000375703 CYP4Z2PQ8N1L4 340 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 ZNF366Q8N895 744 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 ZNF740Q8NDX6 193 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 NLNQ9BYT8 704 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 MIR1-1HGQ9H1L0 117 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 NMNAT1Q9HAN9 279 aaPredicted RBP13.9□□□□□ -0.18
MSH5-201ENST00000375703 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
MSH5-201ENST00000375703 MIEF1Q9NQG6 463 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 TDP1Q9NUW8 608 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 CNOT2Q9NZN8 540 aaKnown RBP13.9□□□□□ -0.18
MSH5-201ENST00000375703 ATP11BQ9Y2G3 1177 aa13.9□□□□□ -0.18
MSH5-201ENST00000375703 ZAR1LA6NP61 321 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 SNPHO15079 494 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 KIAA0513O60268 411 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 CNR2P34972 360 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 DSTNP60981 165 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 TSTQ16762 297 aaKnown RBP13.89□□□□□ -0.19
MSH5-201ENST00000375703 FAM180BQ6P0A1 224 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 ANKRD33Q7Z3H0 272 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 TRMT11Q7Z4G4 463 aaKnown RBP13.89□□□□□ -0.19
MSH5-201ENST00000375703 TRAPPC5Q8IUR0 188 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 NRSN1Q8IZ57 195 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 DEFB118Q96PH6 123 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 ZBP1Q9H171 429 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 OR2AG1Q9H205 316 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 EPHX3Q9H6B9 360 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 ITGB1BP2Q9UKP3 347 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 FGF18O76093 207 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 KCNK2O95069 426 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 ADRA2AP08913 450 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 UQCRC2P22695 453 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 DGKEP52429 567 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 TEAD2Q15562 447 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 KCNJ8Q15842 424 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 ZNF658BQ4V348 819 aaPredicted RBP13.89□□□□□ -0.19
MSH5-201ENST00000375703 REEP3Q6NUK4 255 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 MMP21Q8N119 569 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 CLIP4Q8N3C7 705 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 SORBS1Q9BX66 1292 aaKnown RBP13.89□□□□□ -0.19
MSH5-201ENST00000375703 DKK3Q9UBP4 350 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 FTSJ1Q9UET6 329 aa13.89□□□□□ -0.19
MSH5-201ENST00000375703 HAT1O14929 419 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 IRS1P35568 1242 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 PIK3CBP42338 1070 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 PUM1Q14671 1186 aaKnown RBP eCLIP13.88□□□□□ -0.19
MSH5-201ENST00000375703 TIMM50Q3ZCQ8 353 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 PLAG1Q6DJT9 500 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 KIAA0907Q7Z7F0 614 aaPredicted RBP13.88□□□□□ -0.19
MSH5-201ENST00000375703 SLC30A8Q8IWU4 369 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 GPR65Q8IYL9 337 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 WDR36Q8NI36 951 aaKnown RBP13.88□□□□□ -0.19
MSH5-201ENST00000375703 NUAK2Q9H093 628 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 ITM2CQ9NQX7 267 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 TAAR2Q9P1P5 351 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 CAB39Q9Y376 341 aaPredicted RBP13.88□□□□□ -0.19
MSH5-201ENST00000375703 PCDHGB6Q9Y5F9 930 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 DENND4CQ5VZ89 1909 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 PNMA8CA0A1B0GUJ8 204 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 CCRL2O00421 344 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 PTTG1O95997 202 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 SPNP16150 400 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 PPM1AP35813 382 aa13.88□□□□□ -0.19
MSH5-201ENST00000375703 TOR1AIP1Q5JTV8 583 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms