RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 EID2BQ96D98 161 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 TSSK6Q9BXA6 273 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 ZCCHC3Q9NUD5 404 aaKnown RBP12.6□□□□□ -0.39
CUL4A-203ENST00000375441 ENPP4Q9Y6X5 453 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 TTC34A8MYJ7 566 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 LEFTY1O75610 366 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 CXCL14O95715 111 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 HLA-EP13747 358 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 IL1RNP18510 177 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 TBPL1P62380 186 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 HBA1P69905 142 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 HNRNPA0Q13151 305 aaKnown RBP12.6□□□□□ -0.39
CUL4A-203ENST00000375441 MRPL58Q14197 206 aaKnown RBP12.6□□□□□ -0.39
CUL4A-203ENST00000375441 GGTA1PQ4G0N0 100 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 SLC8B1Q6J4K2 584 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 ZNF730Q6ZMV8 503 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 LMNTD1Q8N9Z9 388 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 OR8J2Q8NGG1 315 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 RAD51AP1Q96B01 352 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 FAIM2Q9BWQ8 316 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 BHLHE41Q9C0J9 482 aaPredicted RBP12.6□□□□□ -0.39
CUL4A-203ENST00000375441 SERHLQ9NQF3 203 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 INIPQ9NRY2 104 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 LEFTY2O00292 366 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 F11P03951 625 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 SOD2P04179 222 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 RHCEP18577 417 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 PCMT1P22061 227 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 SOX3P41225 446 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 CALHM3Q86XJ0 350 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.6□□□□□ -0.39
CUL4A-203ENST00000375441 C10orf111Q8N326 155 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 ZNF614Q8N883 585 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 SLC5A11Q8WWX8 675 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 KCTD7Q96MP8 289 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 NIPSNAP1Q9BPW8 284 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 CLSTN3Q9BQT9 956 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 SERHL2Q9H4I8 314 aa12.6□□□□□ -0.39
CUL4A-203ENST00000375441 NMNAT1Q9HAN9 279 aaPredicted RBP12.6□□□□□ -0.39
CUL4A-203ENST00000375441 MRPS7Q9Y2R9 242 aaKnown RBP12.6□□□□□ -0.39
CUL4A-203ENST00000375441 HNRNPCL2B2RXH8 293 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 C1GALT1C1LP0DN25 315 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 PSKH1P11801 424 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 HNRNPFP52597 415 aaKnown RBP12.59□□□□□ -0.39
CUL4A-203ENST00000375441 PTSQ03393 145 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 KIAA0040Q15053 153 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CLEC12AQ5QGZ9 265 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 PRAMEF14Q5SWL7 426 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 C9orf64Q5T6V5 341 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 PRAMEF13Q5VWM6 474 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 HMGN2P46Q86SG4 172 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 RASSF5Q8WWW0 418 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 TTYH2Q9BSA4 534 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 SIAEQ9HAT2 523 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 PLAGL1Q9UM63 463 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CMAHPQ9Y471 501 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 MGAMO43451 1857 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 OR1F1O43749 312 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CBX2Q14781 532 aaPredicted RBP12.59□□□□□ -0.39
CUL4A-203ENST00000375441 EIF4HQ15056 248 aaKnown RBP12.59□□□□□ -0.39
CUL4A-203ENST00000375441 LINC01599Q8WXQ3 324 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 SORCS1Q8WY21 1168 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 GLYATL1Q969I3 302 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 NEIL2Q969S2 332 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 ZBED6CLQ96FA7 236 aaPredicted RBP12.59□□□□□ -0.39
CUL4A-203ENST00000375441 RLIMQ9NVW2 624 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 ING3Q9NXR8 418 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CFAP20Q9Y6A4 193 aaKnown RBP12.59□□□□□ -0.39
CUL4A-203ENST00000375441 TRIM64A6NGJ6 449 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 OR6C70A6NIJ9 312 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 RTCAO00442 366 aaKnown RBP12.59□□□□□ -0.39
CUL4A-203ENST00000375441 LATS1O95835 1130 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CCNYL3P0C7X3 344 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 ACPPP15309 386 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 COX10Q12887 443 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CEP78Q5JTW2 689 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 UBE2UQ5VVX9 321 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 PLAG1Q6DJT9 500 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 C16orf62Q7Z3J2 963 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 SLC30A8Q8IWU4 369 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 FIBINQ8TAL6 211 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 OR5M11Q96RB7 305 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 NDUFAF4Q9P032 175 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 KLHL42Q9P2K6 505 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 MGAT4BQ9UQ53 548 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 PRKAB1Q9Y478 270 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 FZD6O60353 706 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 UGDHO60701 494 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 POP7O75817 140 aaKnown RBP12.59□□□□□ -0.39
CUL4A-203ENST00000375441 PIK3CBP42338 1070 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 RAB25P57735 213 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 BCL7AQ4VC05 210 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 KLHL22Q53GT1 634 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 FAM26DQ5JW98 314 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 FRMPD2BQ6IN97 320 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CDC73Q6P1J9 531 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 BHLHB9Q6PI77 547 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CACTIN-AS1Q8N1I8 211 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 CELF2-AS1Q8N7Q2 184 aa12.59□□□□□ -0.39
CUL4A-203ENST00000375441 MYLIPQ8WY64 445 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms