RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 LTBP3Q9NS15 1303 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GLOD5A6NK44 160 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 TRIM64CA6NLI5 447 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 H7BY64 318 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 PRODHO43272 600 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GALTP07902 379 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 IL3P08700 152 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF8P17098 575 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 ITGA3P26006 1051 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 C22orf42Q6IC83 251 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 Q8N402 240 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 SLC5A8Q8N695 610 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GPR150Q8NGU9 434 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 GLYATL1Q969I3 302 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 PRAP1Q96NZ9 151 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 C17orf62Q9BQA9 187 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 CARS2Q9HA77 564 aaKnown RBP11.1□□□□□ -0.63
PTCH1-203ENST00000375274 ARNT2Q9HBZ2 717 aa11.1□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF840PA6NDX5 716 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 CLCA1A8K7I4 914 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ATE1O95260 518 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 PTTG1O95997 202 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 MT-ND5P03915 603 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 LAMP1P11279 417 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 PGDP52209 483 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF234Q14588 700 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 LY6G5CQ5SRR4 150 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ZCCHC12Q6PEW1 402 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 DCDC5Q6ZRR9 648 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 SCD5Q86SK9 330 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 LHFPL3Q86UP9 236 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 C7orf57Q8NEG2 295 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 C15orf40Q8WUR7 153 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 OR2B2Q9GZK3 357 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 NLGN3Q9NZ94 848 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 CDH7Q9ULB5 785 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 MAGED1Q9Y5V3 778 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 TRAV6A0A075B6T7 132 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ELOA3DA6NLF2 546 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 KDM4BO94953 1096 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 PTGS2P35354 604 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 MAGEA3P43357 314 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 BTN3A2P78410 334 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 RPL6Q02878 288 aaKnown RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ELOA3BQ3SY89 546 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 SNAP47Q5SQN1 464 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 BTN2A1Q7KYR7 527 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 PIANPQ8IYJ0 282 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 SAMD12Q8N8I0 201 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 DENND6BQ8NEG7 585 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ATP6V1C2Q8NEY4 427 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ELOA3Q8NG57 546 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 NR4A3Q92570 626 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 BHLHE41Q9C0J9 482 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 K7ERQ8 282 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 L7N2F9 121 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF823P16415 610 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 NDUFS1P28331 727 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ETV3P41162 512 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 NRIP1P48552 1158 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 BTBD16Q32M84 506 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 PKDCCQ504Y2 493 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 PAPD5Q8NDF8 572 aaKnown RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ENPP5Q9UJA9 477 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ACSL6Q9UKU0 697 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 INTS6Q9UL03 887 aaKnown RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 PCDHGB6Q9Y5F9 930 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 KRBA1A5PL33 1030 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ARNTLO00327 626 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 RPP14O95059 124 aaKnown RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ALPPL2P10696 532 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 CLCN7P51798 805 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 XKRXQ6PP77 449 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 QSOX2Q6ZRP7 698 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 MSANTD1Q6ZTZ1 278 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 CLEC14AQ86T13 490 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 MAL2Q969L2 176 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 LRR1Q96L50 414 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 SECISBP2Q96T21 854 aaKnown RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 MNTQ99583 582 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 LYARQ9NX58 379 aaKnown RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 TAS2R10Q9NYW0 307 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 IL17CQ9P0M4 197 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 PLAGL1Q9UM63 463 aa11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ZFR2Q9UPR6 939 aaKnown RBP11.09□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF821O75541 412 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-203ENST00000375274 OAZ2O95190 189 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 ALDOCP09972 364 aaKnown RBP11.08□□□□□ -0.64
PTCH1-203ENST00000375274 OR12D1P0DN82 309 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 TAS2R43P59537 309 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 LMAN2Q12907 356 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 GALNTL5Q7Z4T8 443 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 RETREG3Q86VR2 466 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms