RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 USP51Q70EK9 711 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 STK32CQ86UX6 486 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SLC30A8Q8IWU4 369 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NEURL3Q96EH8 262 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 HSH2DQ96JZ2 352 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ORAI3Q9BRQ5 295 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FAIM2Q9BWQ8 316 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MRPS26Q9BYN8 205 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NLNQ9BYT8 704 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 LMAN1LQ9HAT1 526 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PRDM7Q9NQW5 492 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PRDM6Q9NQX0 595 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ANKMY1Q9P2S6 941 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 RAPGEFL1Q9UHV5 662 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ACSL6Q9UKU0 697 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 VCANP13611 3396 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CEP192Q8TEP8 1941 aa17.11■□□□□ 0.33
HLA-DQB1-201ENST00000374943 A0A1W2PPC4 97 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR2A25A4D2G3 310 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR5K4A6NMS3 321 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 C4orf51C9J302 202 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NOBOXO60393 691 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 DPM1O60762 260 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FABP3P05413 133 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 HIST1H1TP22492 207 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SOAT1P35610 550 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 DCTP40126 519 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 UBE2IP63279 158 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TCEA2Q15560 299 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CCDC85BQ15834 202 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZNF630Q2M218 657 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TOR1AIP1Q5JTV8 583 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OTUD3Q5T2D3 398 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SAXO2Q658L1 398 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ANGPTL8Q6UXH0 198 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 RNF130Q86XS8 419 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 HIPK1Q86Z02 1210 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 AMER3Q8N944 861 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MAL2Q969L2 176 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZBED6CLQ96FA7 236 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 RBM4BQ9BQ04 359 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 RBM4Q9BWF3 364 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OSBPL10Q9BXB5 764 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GABARAPL1Q9H0R8 117 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ABCG4Q9H172 646 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TM9SF3Q9HD45 589 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 C2orf42Q9NWW7 574 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ADPRHL2Q9NX46 363 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KIR2DS5A0A0G2JLQ3 304 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 A0A0G2JNG1 304 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KIR2DS3K7RE56 304 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PPM1DO15297 605 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ERI3O43414 337 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GUCY1B2O75343 617 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GCM2O75603 506 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FKBP9O95302 570 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 H6PDO95479 791 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SNAP29O95721 258 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 THEGLP0DJG4 465 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ARAFP10398 606 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 THRBP10828 461 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ATP5A1P25705 553 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MANFP55145 182 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 STXBP1P61764 594 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 EPS8Q12929 822 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SPIDRQ14159 915 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GPR18Q14330 331 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FZD2Q14332 565 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GAS6Q14393 721 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SLC9A5Q14940 896 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KIR2DS5Q14953 304 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SKIV2LQ15477 1246 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 LEXMQ3ZCV2 418 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SHQ1Q6PI26 577 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GALNT10Q86SR1 603 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TRIM48Q8IWZ4 208 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR5AK3PQ8NH89 298 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 NT5CQ8TCD5 201 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TRAPPC9Q96Q05 1148 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 OR2A14Q96R47 310 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SYNPO2LQ9H987 977 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SIRT3Q9NTG7 399 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 IFT80Q9P2H3 777 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CA14Q9ULX7 337 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MRPS17Q9Y2R5 130 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ASB4Q9Y574 426 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KLK4Q9Y5K2 254 aa17.1■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PRUNE2Q8WUY3 3088 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 H3BNH8 94 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ZW10O43264 779 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SUV39H1O43463 412 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ALBP02768 609 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 GNAO1P09471 354 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 UGT2B7P16662 529 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 IST1P53990 364 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TGM3Q08188 693 aa17.09■□□□□ 0.33
HLA-DQB1-201ENST00000374943 FZD5Q13467 585 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms