RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 NUDT8Q8WV74 236 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 GFM2Q969S9 779 aaKnown RBP16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 VPS33AQ96AX1 596 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 PHOX2BQ99453 314 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 PRPF18Q99633 342 aaKnown RBP16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 BHLHE41Q9C0J9 482 aaPredicted RBP16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 CUTCQ9NTM9 273 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 FAM120CQ9NX05 1096 aaKnown RBP16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 MS4A12Q9NXJ0 267 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 TAS2R7Q9NYW3 318 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 LEF1Q9UJU2 399 aaPredicted RBP16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 SERTAD3Q9UJW9 196 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 DAPP1Q9UN19 280 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 SRPK3Q9UPE1 567 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 MAN2B2Q9Y2E5 1009 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 ATG4BQ9Y4P1 393 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 PCDHA9Q9Y5H5 950 aa16.3■□□□□ 0.2
HLA-DMA-201ENST00000374843 EP300Q09472 2414 aaPredicted RBP16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 A0A1W2PR48 441 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 GABRR3A8MPY1 467 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 H0YIG0 161 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 TMX2-CTNND1H3BSU7 103 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 MRASO14807 208 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 PROM1O43490 865 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 NR2F6P10588 404 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 CSRP1P21291 193 aaKnown RBP16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 CSTF2P33240 577 aaKnown RBP eCLIP16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 DGKQP52824 942 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 ARSFP54793 590 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 LIM2P55344 173 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 WNT3P56703 355 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 PHC1P78364 1004 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 MC1RQ01726 317 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 RUNX2Q13950 521 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 TRIP6Q15654 476 aaKnown RBP16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 FAM214AQ32MH5 1076 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 ZNF385BQ569K4 471 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 CPTPQ5TA50 214 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 NDUFAF5Q5TEU4 345 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 ASRGL1Q7L266 308 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 MMP21Q8N119 569 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 CA13Q8N1Q1 262 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 NATD1Q8N6N6 113 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 PCYOX1LQ8NBM8 494 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 RBM15BQ8NDT2 890 aaKnown RBP16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 OR9A4Q8NGU2 314 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 FBXO27Q8NI29 283 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 ADAMTS18Q8TE60 1221 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 ROPN1LQ96C74 230 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 PPCDCQ96CD2 204 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 MAPKAP1Q9BPZ7 522 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 ACTR5Q9H9F9 607 aaPredicted RBP16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 EFCAB1Q9HAE3 211 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 ATAD3AQ9NVI7 634 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 IRAK4Q9NWZ3 460 aa16.29■□□□□ 0.2
HLA-DMA-201ENST00000374843 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 C1orf226A1L170 272 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 ZNF860A6NHJ4 632 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 B4E171 279 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 FXYD1O00168 92 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 DSCR3O14972 297 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 ZNF749O43361 778 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 HYAL3O43820 417 aaPredicted RBP16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 SCN2BO60939 215 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 RDH16O75452 317 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 LAMP1P11279 417 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 FGF5P12034 268 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 ITGAXP20702 1163 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 PTPN4P29074 926 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 TSPAN7P41732 249 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 NUDT2P50583 147 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 LRRC74AQ0VAA2 488 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 IL11RAQ14626 422 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 TRMT5Q32P41 509 aaKnown RBP16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 DNAL1Q4LDG9 190 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 C8orf82Q6P1X6 216 aaPredicted RBP16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 RINLQ6ZS11 566 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 TICAM1Q8IUC6 712 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 EFCAB3Q8N7B9 438 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 FAM47BQ8NA70 645 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 NETO1Q8TDF5 533 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 OR6C1Q96RD1 312 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 OR52E6Q96RD3 313 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 NPAS2Q99743 824 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 DUSP26Q9BV47 211 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 SERHLQ9NQF3 203 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 MIEF1Q9NQG6 463 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 NDE1Q9NXR1 346 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 TAS2R1Q9NYW7 299 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 MAP10Q9P2G4 905 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 RARRES3Q9UL19 164 aa16.28■□□□□ 0.2
HLA-DMA-201ENST00000374843 A0A0A6YYC8 382 aaPredicted RBP16.27■□□□□ 0.2
HLA-DMA-201ENST00000374843 B2RBV5 119 aa16.27■□□□□ 0.2
HLA-DMA-201ENST00000374843 I3L1I5 382 aaPredicted RBP16.27■□□□□ 0.2
HLA-DMA-201ENST00000374843 SGK494L7N484 410 aa16.27■□□□□ 0.2
HLA-DMA-201ENST00000374843 RNASET2O00584 256 aaKnown RBP16.27■□□□□ 0.2
HLA-DMA-201ENST00000374843 AIM2O14862 343 aa16.27■□□□□ 0.2
HLA-DMA-201ENST00000374843 NPPAP01160 153 aa16.27■□□□□ 0.2
HLA-DMA-201ENST00000374843 HOXB9P17482 250 aaPredicted RBP16.27■□□□□ 0.2
HLA-DMA-201ENST00000374843 BUD31P41223 144 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms