RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TM9SF3Q9HD45 589 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 HS3ST3A1Q9Y663 406 aa18.64■□□□□ 0.57
HDAC1-201ENST00000373548 OR6B1O95007 311 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 DIRAS1O95057 198 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 KRT75O95678 551 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 GSTM2P28161 218 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 FRKP42685 505 aaPredicted RBP18.63■□□□□ 0.57
HDAC1-201ENST00000373548 PCBP4P57723 403 aaKnown RBP18.63■□□□□ 0.57
HDAC1-201ENST00000373548 TRA2BP62995 288 aaKnown RBP18.63■□□□□ 0.57
HDAC1-201ENST00000373548 EEF1A2Q05639 463 aaKnown RBP18.63■□□□□ 0.57
HDAC1-201ENST00000373548 BIRC2Q13490 618 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 IQCCQ4KMZ1 466 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 SHQ1Q6PI26 577 aaKnown RBP18.63■□□□□ 0.57
HDAC1-201ENST00000373548 HIPK1Q86Z02 1210 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 NATD1Q8N6N6 113 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 OR13H1Q8NG92 308 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 NFKBIDQ8NI38 313 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 EXOSC8Q96B26 276 aaKnown RBP18.63■□□□□ 0.57
HDAC1-201ENST00000373548 MS4A6EQ96DS6 147 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 MBOAT4Q96T53 435 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 RAD21L1Q9H4I0 556 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 TRNAU1APQ9NX07 287 aaKnown RBP18.63■□□□□ 0.57
HDAC1-201ENST00000373548 ADPRHL2Q9NX46 363 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 PCDHGA4Q9Y5G9 962 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 SNX8Q9Y5X2 465 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 DGKBQ9Y6T7 804 aa18.63■□□□□ 0.57
HDAC1-201ENST00000373548 SMIM31A0A1B0GVY4 71 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 BTN3A3O00478 584 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 AXIN1O15169 862 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 SUV39H1O43463 412 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 F3P13726 295 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 PRIM2P49643 509 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 MANFP55145 182 aaKnown RBP18.62■□□□□ 0.57
HDAC1-201ENST00000373548 KCNJ10P78508 379 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 SCARB2Q14108 478 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 PIWIL3Q7Z3Z3 882 aaKnown RBP18.62■□□□□ 0.57
HDAC1-201ENST00000373548 C7orf34Q96L11 122 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 PHF7Q9BWX1 381 aaPredicted RBP18.62■□□□□ 0.57
HDAC1-201ENST00000373548 NLNQ9BYT8 704 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 POLMQ9NP87 494 aaPredicted RBP18.62■□□□□ 0.57
HDAC1-201ENST00000373548 IFT80Q9P2H3 777 aaPredicted RBP18.62■□□□□ 0.57
HDAC1-201ENST00000373548 SNX7Q9UNH6 387 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 SNX11Q9Y5W9 270 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 TRIOBPQ9H2D6 2365 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 IGLV3-19P01714 112 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 NR1H2P55055 460 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 CDH15P55291 814 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 PLCL1Q15111 1095 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 CEP68Q76N32 757 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 ABI3BPQ7Z7G0 1075 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 TBC1D19Q8N5T2 526 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 MFSD9Q8NBP5 474 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 MUS81Q96NY9 551 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 BARD1Q99728 777 aaKnown RBP18.62■□□□□ 0.57
HDAC1-201ENST00000373548 SRMSQ9H3Y6 488 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 TMEFF2Q9UIK5 374 aaPredicted RBP18.62■□□□□ 0.57
HDAC1-201ENST00000373548 CYP8B1Q9UNU6 501 aa18.62■□□□□ 0.57
HDAC1-201ENST00000373548 TRIM64A6NGJ6 449 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 ERI3O43414 337 aaKnown RBP18.61■□□□□ 0.57
HDAC1-201ENST00000373548 HS6ST1O60243 411 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 DDX5P17844 614 aaKnown RBP18.61■□□□□ 0.57
HDAC1-201ENST00000373548 TOR1AIP1Q5JTV8 583 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 ABHD17CQ6PCB6 329 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 SLC22A18ASQ8N1D0 253 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 DOHHQ9BU89 302 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 AMBRA1Q9C0C7 1298 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 PRDM7Q9NQW5 492 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 SIRT3Q9NTG7 399 aaPredicted RBP18.61■□□□□ 0.57
HDAC1-201ENST00000373548 FAM118AQ9NWS6 357 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 TAS2R7Q9NYW3 318 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 BAG5Q9UL15 447 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 PRAMEF26H0Y7S4 382 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 OPN1SWP03999 348 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 ARAFP10398 606 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 SRFP11831 508 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 ITGA1P56199 1179 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 SELENOWP63302 87 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 CDK6Q00534 326 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 HSPB3Q12988 150 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 ZNF630Q2M218 657 aaPredicted RBP18.61■□□□□ 0.57
HDAC1-201ENST00000373548 PRRT3Q5FWE3 981 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 NDUFAF5Q5TEU4 345 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 SAXO2Q658L1 398 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 KIAA0895LQ68EN5 471 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 TMEM26Q6ZUK4 368 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 CCDC80Q76M96 950 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 PAQR7Q86WK9 346 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 ARL10Q8N8L6 244 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 OR8K5Q8NH50 307 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 TAMM41Q96BW9 452 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 NEURL3Q96EH8 262 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 TOE1Q96GM8 510 aaKnown RBP18.61■□□□□ 0.57
HDAC1-201ENST00000373548 GABARAPL1Q9H0R8 117 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 UBE2ZQ9H832 354 aaPredicted RBP18.61■□□□□ 0.57
HDAC1-201ENST00000373548 NEUROD4Q9HD90 331 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 SLC2A4RGQ9NR83 387 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 NDUFA13Q9P0J0 144 aa18.61■□□□□ 0.57
HDAC1-201ENST00000373548 MYO1GB0I1T2 1018 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 DRD2P14416 443 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 PIGAP37287 484 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms