RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 MILR1Q7Z6M3 343 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 ARL6IP6Q8N6S5 226 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 OR6Q1Q8NGQ2 317 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 IGFLR1Q9H665 355 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 ZDHHC6Q9H6R6 413 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 YIPF1Q9Y548 306 aa6.36□□□□□ -1.39
CHD6-203ENST00000373233 ZNF487B1APH4 448 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 MAFKO60675 156 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 GABRR2P28476 465 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 MAXP61244 160 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 FOXM1Q08050 763 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 MTAPQ13126 283 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 VTCN1Q7Z7D3 282 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 CMC1Q7Z7K0 106 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 CNIH3Q8TBE1 160 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SLC38A1Q9H2H9 487 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 PTTG3PQ9NZH4 202 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 MARK1Q9P0L2 795 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 APC2O95996 2303 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 LCHNA4D1U4 455 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 DFFBO76075 338 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SLC6A2P23975 617 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 PPP3R1P63098 170 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SIX1Q15475 284 aaPredicted RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 CHRNA6Q15825 494 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 PPP1R3AQ16821 1122 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 ALG11Q2TAA5 492 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 LACC1Q8IV20 430 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 GJD3Q8N144 294 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 RIPOR3Q96MK2 946 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 EIF5A2Q9GZV4 153 aaKnown RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 SCN5AQ14524 2016 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 MTMR11A4FU01 709 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TBX18O95935 607 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 IFNW1P05000 195 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 HLA-DQB2P05538 268 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SLC2A5P22732 501 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 VEGFCP49767 419 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 CERCAMQ5T4B2 595 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TMEM198Q66K66 360 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 RHBDF2Q6PJF5 856 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 BAIAP2L2Q6UXY1 529 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 CHSY3Q70JA7 882 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 ZFP82Q8N141 532 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 ZNF781Q8N8C0 355 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 LILRB1Q8NHL6 650 aaPredicted RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 POLR2J2Q9GZM3 115 aaKnown RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 DNTTIP1Q9H147 329 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 PRDM8Q9NQV8 689 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TAS2R13Q9NYV9 303 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SNRNP200O75643 2136 aaKnown RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 FAM155BO75949 473 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TMEM63AO94886 807 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 REEP5Q00765 189 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 NRG1Q02297 640 aaPredicted RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 C2orf80Q0P641 193 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SETMARQ53H47 684 aaPredicted RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 TMIGD2Q96BF3 282 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TNKS2Q9H2K2 1166 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 MOCS1Q9NZB8 636 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SIRPGQ9P1W8 387 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 KIAA0513O60268 411 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 BCAS1O75363 584 aaPredicted RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 ATP6AP2O75787 350 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 NDST3O95803 873 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 MLLT3P42568 568 aaPredicted RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 ARCN1P48444 511 aaKnown RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 GPR17Q13304 367 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 ARHGAP11BQ3KRB8 267 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SCGB2B2Q4G0G5 96 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 ABCA11PQ4W5N1 156 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 GCNT6Q5T4J0 391 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 EPGNQ6UW88 154 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 CARM1Q86X55 608 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 HS6ST3Q8IZP7 471 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 KDM1BQ8NB78 822 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 CLCC1Q96S66 551 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TTLL2Q9BWV7 592 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 SLC39A8Q9C0K1 460 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 FBXL3Q9UKT7 428 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 MED12Q93074 2177 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 BORCS7-ASMTA0A0B4J1R7 106 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 HEPACAMQ14CZ8 416 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TATDN3Q17R31 274 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 STXBP5Q5T5C0 1151 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 NAPRTQ6XQN6 538 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 GTPBP8Q8N3Z3 284 aaPredicted RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 TRMT10AQ8TBZ6 339 aaKnown RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 IGSF21Q96ID5 467 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 OPA3Q9H6K4 179 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 ZBTB20Q9HC78 741 aaPredicted RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 SCN3AQ9NY46 2000 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 C13orf42A0A1B0GVH6 325 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TCRBV7S3A2A0A539 114 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 ELOVL7A1L3X0 281 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 TO15178 435 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 NPHS1O60500 1241 aa6.35□□□□□ -1.39
CHD6-203ENST00000373233 GATBO75879 557 aaKnown RBP6.35□□□□□ -1.39
CHD6-203ENST00000373233 HLA-DQA2P01906 255 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms