RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LHPPQ9H008 270 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 OR6C2Q9NZP2 312 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 HSPE1-MOB4S4R3N1 261 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 SOBPA7XYQ1 873 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 H3BMQ9 156 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 CCKBRP32239 447 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 MINDY4Q4G0A6 757 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 PINK1Q9BXM7 581 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 ZNF230Q9UIE0 474 aaPredicted RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 ZNF510Q9Y2H8 683 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 DLDP09622 509 aaKnown RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 ETV5P41161 510 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 TRMT10BQ6PF06 316 aaKnown RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 PRSS48Q7RTY5 328 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 OR51G2Q8NGK0 314 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 OR8D1Q8WZ84 308 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 APMAPQ9HDC9 416 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 ZCCHC3Q9NUD5 404 aaKnown RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 MRPL15Q9P015 296 aaKnown RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 DHDHQ9UQ10 334 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 TNFRSF10BO14763 440 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 CCR8P51685 355 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 PIGFQ07326 219 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 RPL13AP3Q6NVV1 102 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 OR10Q1Q8NGQ4 319 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 NT5C3BQ969T7 300 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 JSRP1Q96MG2 331 aaPredicted RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 NRXN1Q9ULB1 1477 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 TRBV2A0A0J9YWF9 115 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 KBTBD6Q86V97 674 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 OR5AK3PQ8NH89 298 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 CNTN3Q9P232 1028 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 B3GNT3Q9Y2A9 372 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 SPTBP11277 2137 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 ABCA6Q8N139 1617 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 MAP1BP46821 2468 aaKnown RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 ERVFC1P60507 584 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 LRP8Q14114 963 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 SF3A2Q15428 464 aaKnown RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 CLVS2Q5SYC1 327 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 RBM23Q86U06 439 aaKnown RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 CFAP52Q8N1V2 620 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 OR2T33Q8NG76 320 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 OR6K2Q8NGY2 324 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 CPT1CQ8TCG5 803 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 TMEM74Q96NL1 305 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 A0A1B0GVG6 124 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 ZNF850A8MQ14 1090 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 DIRAS3O95661 229 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 GJA5P36382 358 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 DPY19L4Q7Z388 723 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 GNPDA2Q8TDQ7 276 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 MITD1Q8WV92 249 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 LMLNQ96KR4 655 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 NTN4Q9HB63 628 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 MBD5Q9P267 1494 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 DNAJB6O75190 326 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 CNTN5O94779 1100 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 HDCP19113 662 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 RAB31Q13636 194 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 CHST9Q7L1S5 443 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 FAM86B1Q8N7N1 296 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 DTX3Q8N9I9 347 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 PDGFDQ9GZP0 370 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 H7C1Q1 480 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 CLDN5O00501 218 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 HRGP04196 525 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 SLC6A6P31641 620 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 NUDT1P36639 197 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 ZNF585AQ6P3V2 769 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 NLGN2Q8NFZ4 835 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 ST7LQ8TDW4 575 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 ADAM7Q9H2U9 754 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 OVOS2A0A0J9YW53 1432 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 LEPRP48357 1165 aaKnown RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 RFX5P48382 616 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 OVOS2Q6IE36 1432 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 NAXEQ8NCW5 288 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 TGM7Q96PF1 710 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 TBL1XR1Q9BZK7 514 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 ZDHHC18Q9NUE0 388 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 SETBP1Q9Y6X0 1596 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 KCNC4Q03721 635 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 RGMAQ96B86 450 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 SLC25A44Q96H78 314 aaPredicted RBP14.73□□□□□ -0.05
COL5A1-201ENST00000371817 PTPN18Q99952 460 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 CRB1P82279 1406 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 MYOCOSA0A1B0GUC4 107 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 SLC15A5A6NIM6 579 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 SLC7A4O43246 635 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 UFM1P61960 85 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 HSD11B2P80365 405 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 LAPTM4AQ15012 233 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 TSTD2Q5T7W7 516 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 OR56A3Q8NH54 315 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 SLC5A11Q8WWX8 675 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 UROC1Q96N76 676 aa14.73□□□□□ -0.05
COL5A1-201ENST00000371817 MYOZ2Q9NPC6 264 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms